LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g00307	ATGGCTACCATAGACGAAAGCGCCACTTCTAAGAGATGGCTTCCTCTTGAAGCTAACCCTGATGTGATGAACCAGTACCTTTGGGATCTTGGCCTTCCGCAGGATGAGGCTGAGTGCTTTGACGTGTACGGTTTAGATGAAGAACTTTTGGAAATGGTTCCAAAGCCTGTGGTTTCTGTGCTTTTCCTTTATCCAATAACCTCAAAGACTGAAGAAGAGAGGTTGCAACAAGAAAATGAAGAAAAGGAATATAGCAGCAAAGTGTATTTTATGAAACAAACAGTGGGCAATGCTTGTGGCACAGTTGGACTTCTTCATGCTGTAGGGAACTTAACTTCTGAGATTAAGCTTGTTGAGGGATCGTTCCTTGATAGGTTCTTTAAATCTACTGCAAGCATGGATGCATTACAGCGAGCAGCGTTTCTTGAGAATGACAGAGAAATGGAAGTTGCTCATTCAGTGGCAGCCGCTGCTGGTGATACAGAGGCATCAGATAATGTGGACACTCATTTCATCTGCTTTGTTTGTGTTGATGGTGAACTTCACGAGCTCGATGGCAGAAAATCTAGGCCAATATCTCATGGCTCCTCCTCCCCAAGTACTTTGTTGAAGGATGCAGCTAAAGTCATACAGAGCATGATCCAGAAAAATCCAGATTCCCTCAACTTCAACGTCATTGCTGTTTCAAAGAAATTTGGGGCTGCTTATTAAGGGCGTCAGTCCGGACTCGTTGTAGTCTTGTTGAAACTACTCGAAAATCGTCAGTAATTTCAAGGGATCCATGTGGCCTTTTACTCACTTATGTTTCCTCGGATTTTATTTCCTGTAGTGATTTTGTAGTACGCTCAGCCACTTGCTCAACCTGTATTTTTT	873	0.4307	MATIDESATSKRWLPLEANPDVMNQYLWDLGLPQDEAECFDVYGLDEELLEMVPKPVVSVLFLYPITSKTEEERLQQENEEKEYSSKVYFMKQTVGNACGTVGLLHAVGNLTSEIKLVEGSFLDRFFKSTASMDALQRAAFLENDREMEVAHSVAAAAGDTEASDNVDTHFICFVCVDGELHELDGRKSRPISHGSSSPSTLLKDAAKVIQSMIQKNPDSLNFNVIAVSKKFGAAY	236

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g00307	236	CDD	Peptidase_C12_UCH_L1_L3	13	227	-	-
	Bach4g00307	236	FunFam	Ubiquitin carboxyl-terminal hydrolase	7	231	-	-
	Bach4g00307	236	SUPERFAMILY	Cysteine proteinases	11	231	IPR038765	-
	Bach4g00307	236	PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	11	230	IPR001578	GO:0004843\|GO:0006511
	Bach4g00307	236	PRINTS	Ubiquitin C-terminal hydrolase (C12) family signature	53	65	IPR001578	GO:0004843\|GO:0006511
	Bach4g00307	236	PRINTS	Ubiquitin C-terminal hydrolase (C12) family signature	15	32	IPR001578	GO:0004843\|GO:0006511
	Bach4g00307	236	PRINTS	Ubiquitin C-terminal hydrolase (C12) family signature	93	110	IPR001578	GO:0004843\|GO:0006511
	Bach4g00307	236	PRINTS	Ubiquitin C-terminal hydrolase (C12) family signature	165	176	IPR001578	GO:0004843\|GO:0006511
	Bach4g00307	236	PRINTS	Ubiquitin C-terminal hydrolase (C12) family signature	181	191	IPR001578	GO:0004843\|GO:0006511
	Bach4g00307	236	Gene3D	-	7	231	IPR036959	GO:0004843\|GO:0006511
	Bach4g00307	236	Pfam	Ubiquitin carboxyl-terminal hydrolase, family 1	13	214	IPR001578	GO:0004843\|GO:0006511

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g00307	Bach-Chr4	1985954	1989753	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g00307	K05609		-	qsa:O6P43_024389	389.808

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach4g00307	4	1985954	1989753	Bach4g00307	4	1985954	1989753	ECH