Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00253 ATGGGAAGCCCCAGAGTATTTCCTCCTTTCTCTGGCCGTCACAACCTCCCCTATTCATACGCTTCTCTCCCTGATGGACCCCACCCAGCCGGAGCTCCGGCTGAGAGTCGCAGGCCATGGAAGGGACTCTTGGTGCTCTCTTGTGGAGTGCTATTAGTTTCCTTGGTGGCCATCAATGGCTACACGAGGGAATCCAATGCCCATTTCCACGCACCTGCTGTTGCTCACAATGTTTCATTGTCTATGTCCAAACAAACAGTACCTCCGACAACATTGGAGCCTGTTTCAGGTGGTGTATCGGCCGGAGTGTCGGAGAAGTCCAACGGGTTATTCGCCGGAGCCAATGTTGCATCATTCCCTTGGAACAATAGTATGCTCTCATGGCAGAGAACCGCTTACCATTTCCAGCCAGAGAAGAATTGGATGAACGGTCCTATGTATTACAAGGGATGGTACCATTTCTTCTATCAGTACAATCCCTATGGTGCAGTTTGGGGTAACATGATAGTGTGGGGCCATGCCGTGTCCAGGGATCTGATCCATTGGCTTCATCTTCCATTGGCAATGGTGGGCGATCAATGGTATGACCAGAAAGGTGTGTGGACAGGTTCTGCCACCATCTTACCTGATGGTCAAGTCATCATGTTATACACTGGTTCCACCAATGAGTCAGTGCAGGTGCAGAACCTTGCCTATCCCGCCGACCCCTCTGACCCGCTCCTCATCAACTGGGTCAAATACCCTGGCAACCCGGTTCTCTTCCCACCACCGGGTATTGGTGCCAAGGACTTCCGTGACCCAACCACTGCTTGGCTCACGTCTGAAGGAAAATGGCGCATCACTATAGGCTCTAAGCTTAATAAAACTGGCATTTCTTTGGTTTATGACACCATAGACTTCAAGAGCTACGAGGCTATCGAGGGGGTTCTCCATGCTGTTCCCAGAACCGGCATGTGGGAGTGTGTGGACTTCTACCCTGTATCCATGACTGTTGATAATGGGTTAGATACATCCATTGCTGGTGATAATGTCAAGCATGTAGTTAAGGTGAGTTTGGATGATGATAGACATGATTACTATGCACTGGGAACCTACGATGAGAACAATGTCAAATTCATACCAGACGACATCAAGAATGATGTTGGTATCGGACTTAGATATGACTATGGTATATTCTATGCTTCCAAAACTTTTTATGATCACAGCAAGGGGAGGAGAGTCTTGTGGGGTTGGATCGGAGAGTCTGATAGTGAAGTTGCCGATGTTACCAAAGGCTGGGCATCTGTTCAGAGCATTCCAAGAACAGTGGTGCTTGATAAAAAGACTGGTAGCAACTTACTTCAATGGCCAGTTGCGGAGGTGGAGAGTTTGAGATTGAGAAGAGACCAATTTAAGAATTTGAAGGCTAGGCCAGGGTCAGTGGTGCCACTAGATGTTGGAACAGCCACACAGTTGGACATAATTGCTGAGTTTGAGATAGAGAAGGAGGCATTGGAGAAGACATCAGAGTCCAATGAGGAGTACACGTGCAGTAGAAGTGGTGGAGCTGCTCAACGAGGAGCCCTGGGACCTTTTGGTCTTCTGGTTCTTGCAGATGATGGCCTCTCTGAATATACTCCGGTCTACTTCTATGTCACTAAAGGAAGCGATGGACATCTTAAAACTTCCATCTGCTCTGATCAAACAAGGTCTTCTTTGGCAACTGATGTTATTAAGCAAATCTTTGGGAGCTCTGTTCCAGTATTGAAAGATGAGAAGTTTTCCGTGAGGATATTGGTGGACCATTCAATAATTGAAAGCTTTGCTCAAGGTGGAAGGACGTGCGTGACATCGCGGGTTTACCCAACAGAGGCAATCTACGGAGCTGCTCGGTTGTTCTTGTTCAACAACGCTACTGAGGCCATAGTGAGTGCCTCCATCAAGGTTTGGCAGATGAATTCTGCATTCATTCATCCATACCATCCTCAACAGATAGCTTCAGTATAA 1986 0.4773 MGSPRVFPPFSGRHNLPYSYASLPDGPHPAGAPAESRRPWKGLLVLSCGVLLVSLVAINGYTRESNAHFHAPAVAHNVSLSMSKQTVPPTTLEPVSGGVSAGVSEKSNGLFAGANVASFPWNNSMLSWQRTAYHFQPEKNWMNGPMYYKGWYHFFYQYNPYGAVWGNMIVWGHAVSRDLIHWLHLPLAMVGDQWYDQKGVWTGSATILPDGQVIMLYTGSTNESVQVQNLAYPADPSDPLLINWVKYPGNPVLFPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGISLVYDTIDFKSYEAIEGVLHAVPRTGMWECVDFYPVSMTVDNGLDTSIAGDNVKHVVKVSLDDDRHDYYALGTYDENNVKFIPDDIKNDVGIGLRYDYGIFYASKTFYDHSKGRRVLWGWIGESDSEVADVTKGWASVQSIPRTVVLDKKTGSNLLQWPVAEVESLRLRRDQFKNLKARPGSVVPLDVGTATQLDIIAEFEIEKEALEKTSESNEEYTCSRSGGAAQRGALGPFGLLVLADDGLSEYTPVYFYVTKGSDGHLKTSICSDQTRSSLATDVIKQIFGSSVPVLKDEKFSVRILVDHSIIESFAQGGRTCVTSRVYPTEAIYGAARLFLFNNATEAIVSASIKVWQMNSAFIHPYHPQQIASV 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00253 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 450 649 IPR013320 -
Bach4g00253 661 Pfam Glycosyl hydrolases family 32 N-terminal domain 134 450 IPR013148 -
Bach4g00253 661 Gene3D Glycosyl hydrolase domain; family 43 138 462 IPR023296 -
Bach4g00253 661 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 462 645 - -
Bach4g00253 661 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 138 462 - -
Bach4g00253 661 Pfam Glycosyl hydrolases family 32 C terminal 453 644 IPR013189 -
Bach4g00253 661 SMART glyco_32 134 605 IPR001362 GO:0004553|GO:0005975
Bach4g00253 661 Gene3D - 463 645 - -
Bach4g00253 661 Pfam Beta-fructofuranosidase, N-terminal domain 19 126 IPR021792 GO:0004564
Bach4g00253 661 SUPERFAMILY Arabinanase/levansucrase/invertase 127 451 IPR023296 -
Bach4g00253 661 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 123 648 - -
Bach4g00253 661 CDD GH32_Fruct1-like 140 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00253 Bach-Chr4 1630768 1633864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00253 1 661 Glycoside Hydrolase AT1G12240 62.979 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00253 K01193 - gmx:100798772 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00253 4 1630768 1633864 Bach10g00219 10 1533546 1536584 BWGD
Bach4g00253 4 1630768 1633864 Bach4g00253 4 1630768 1633864 ECH