Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach4g00226 | ATGGCCTCCTTAAATACAACCATGTCTGTCCAATCGGGTCGAATCAGAACGCTGAAAGAAGGATCGCCGCAGTTTGACGGAGTAGTAGGTCCTGTTGTATATTGGATGTTTAGAGATCAACGGCTGAGAGACAATTGGGCTCTCATCTACGCCCTTCATCAGGCCAACAAAGCCAATGTTCCCGTAGCCATCGTTTTCAATCTCTTCGATCATTTTCTCGGCGCGAAAGCCCGCCAGTTAGGGTTTATGTTGAGAGGTTTGCAGCAATTGTCACAGGAAAATGAACAGGCTCTTCAAATCCCCTTTTTCTTGTTTCGGGGAGAGGCAGAGGAAAATGTGCCTGATTTTATCAGAGAATGTGGAGCTTCGCTGTTGGTTACAGACTTTTCACCCTTGAGACAAGTGCGGAAGTGCAAAGAGGAGATTTGCAAGAGGGTAAGCGACTCGGTTACCATACATGAAGTTGATGCTCATAATATAGTACCCCTTTGGGTAACCTCAGACAAGTTGGAGTACAGTGCTAGGACCATAAGAGGAAAGATAAACAAACGGCTTTCTGAGTACCTTATTGATTTTCCTAATATTGAACCACCATCTAGGAAGTGGGTCACTAAGAATCACTCAATCGATTGGGATAGTCTCATTGCTGATGTATTAAGGAGAGGAGCAGAGGTTCCTGAAATACATTGGTGTGAGCCTGGAGAAACTGCTGCAATGCAAGTTCTGATGGGAAGTAAAAATGGATTCTTAACTAAGAGGTTGAAAACGTATACTGGGGATCGGAATGACCCGGCAAAGCCTAGTGCGCTTTCTGGTTTGTCTCCCTATTTGCATTTTGGACAGATATCTGCTCAGCGTTGTGCCTTAGAAGCACGTAAGCTCCGACATTCATGTCCTCAGGCAGTTGATACTTTTTTGGAGGAGTTGATTGTGCGGAGAGAACTTGCTGATAACTTTTGCTTCTATCAGCCACATTATGATTCACTACAGGGAGCATGGGAGTGGGCTCGTAAGACCTTACTGGACCATGCCAAAGATAAGCGAGAACATATTTACTCGAGGGACCAATTGGAGAAGGCACAAACTGCTGATCCTCTCTGGAATGCTTCTCAGTTGGAGATGGTTTACCATGGGAAAATGCATGGTTTTATGCGGCAAAAGATACTCGAGTGGACAAGAGGACCTGAAGAAGCGCTGGAGATATCCATATATTTAAACGATAAGTATGAAATAGACGGGAGGGATCCAAATGGTTATGTTGGCTGCATGTGGTCAATATGTGGTGTACATGATCAGGTTAGATTGTTTGATTTGAAAGGCACACCGATCGTAGATGAAAACCCTTATCATCGTGGTAGCTAA | 1362 | 0.4449 | MASLNTTMSVQSGRIRTLKEGSPQFDGVVGPVVYWMFRDQRLRDNWALIYALHQANKANVPVAIVFNLFDHFLGAKARQLGFMLRGLQQLSQENEQALQIPFFLFRGEAEENVPDFIRECGASLLVTDFSPLRQVRKCKEEICKRVSDSVTIHEVDAHNIVPLWVTSDKLEYSARTIRGKINKRLSEYLIDFPNIEPPSRKWVTKNHSIDWDSLIADVLRRGAEVPEIHWCEPGETAAMQVLMGSKNGFLTKRLKTYTGDRNDPAKPSALSGLSPYLHFGQISAQRCALEARKLRHSCPQAVDTFLEELIVRRELADNFCFYQPHYDSLQGAWEWARKTLLDHAKDKREHIYSRDQLEKAQTADPLWNASQLEMVYHGKMHGFMRQKILEWTRGPEEALEISIYLNDKYEIDGRDPNGYVGCMWSICGVHDQVRLFDLKGTPIVDENPYHRGS | 453 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach4g00226 | 453 | Gene3D | HUPs | 8 | 157 | IPR014729 | - | |
| Bach4g00226 | 453 | ProSiteProfiles | Photolyase/cryptochrome alpha/beta domain profile. | 30 | 163 | IPR006050 | - | |
| Bach4g00226 | 453 | FunFam | Deoxyribodipyrimidine photolyase | 329 | 439 | - | - | |
| Bach4g00226 | 453 | SUPERFAMILY | Cryptochrome/photolyase FAD-binding domain | 221 | 436 | IPR036134 | - | |
| Bach4g00226 | 453 | FunFam | Deoxyribodipyrimidine photolyase | 158 | 328 | - | - | |
| Bach4g00226 | 453 | Gene3D | DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 | 329 | 440 | - | - | |
| Bach4g00226 | 453 | Gene3D | - | 158 | 328 | - | - | |
| Bach4g00226 | 453 | FunFam | Deoxyribodipyrimidine photolyase | 9 | 157 | - | - | |
| Bach4g00226 | 453 | Pfam | DNA photolyase | 32 | 194 | IPR006050 | - | |
| Bach4g00226 | 453 | SUPERFAMILY | Cryptochrome/photolyase, N-terminal domain | 31 | 212 | IPR036155 | - | |
| Bach4g00226 | 453 | ProSitePatterns | DNA photolyases class 2 signature 1. | 305 | 319 | IPR032673 | - | |
| Bach4g00226 | 453 | PANTHER | DEOXYRIBODIPYRIMIDINE PHOTOLYASE | 5 | 432 | - | - | |
| Bach4g00226 | 453 | NCBIfam | deoxyribodipyrimidine photo-lyase | 8 | 432 | IPR008148 | GO:0003904|GO:0006281 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach4g00226 | K01669 | - | qsa:O6P43_034147 | 748.814 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bach4g00226 | 4 | 1478257 | 1481671 | Bach4g00226 | 4 | 1478257 | 1481671 | ECH |