Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00167 ATGAACCACATCCGTGTCTTGCTTTCTACTGCTGCCTTTTTGTTTGAGTTCGGCTATGCAGCCAGATTTGATGTTCGTAACAAGTGCCCATATACAGTGTGGGCAGCAGCTGTGCCGGGAGGTGGCGAGAGGTTGAATCAAGGTGAAACGTGGACTTTTGATGTCAGCCCCGGAACGAAGCAAGCTCGCATCTGGGCTCGAACCCATTGCAGTTTTGACAAATCTGGGCGTGGAAGATGTCAGACCGGTGATTGTGGTGGTGTCTTCGAGTGCAAAGACTATGGTGCACCACCAAATACCCTGGCTGAGTATGGCTTGAACCAGTACAACAACCTGGATCTCTTCCATATCTCTCTTGTTGATGGCTTCAATGTTCCTATGGAATTTAGTCCCACATCTAGAGGGTGCCGAGGCATAAAATGCGCCGCCAATATCAACGGTCAATGTCCTAGAGAGCTCAAGGCTCCTGGTGGTTGCAACAATCCATGTACTGTGTTCAAAACGGATCAGTATTGTTGCAATTCTGGGAATTGCGGGCCCACCAATTATTCCATGTTTTTTAAGAATCTCTGCCCCGATGTTTGTAGTTACCCCGAGGATGATGCCACCAGCACCTTTACGTGCCCTAGTGGGACTGGCTACACGGTTGTGTTTTGTCCTTGA 663 0.4902 MNHIRVLLSTAAFLFEFGYAARFDVRNKCPYTVWAAAVPGGGERLNQGETWTFDVSPGTKQARIWARTHCSFDKSGRGRCQTGDCGGVFECKDYGAPPNTLAEYGLNQYNNLDLFHISLVDGFNVPMEFSPTSRGCRGIKCAANINGQCPRELKAPGGCNNPCTVFKTDQYCCNSGNCGPTNYSMFFKNLCPDVCSYPEDDATSTFTCPSGTGYTVVFCP 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00167 220 SMART tha2 23 220 IPR001938 -
Bach4g00167 220 PIRSF PR5 1 220 IPR001938 -
Bach4g00167 220 Gene3D Thaumatin 20 220 IPR037176 -
Bach4g00167 220 ProSiteProfiles Thaumatin family profile. 20 220 IPR001938 -
Bach4g00167 220 Pfam Thaumatin family 27 220 IPR001938 -
Bach4g00167 220 PRINTS Pathogenesis-related protein signature 76 105 IPR001938 -
Bach4g00167 220 PRINTS Pathogenesis-related protein signature 210 219 IPR001938 -
Bach4g00167 220 PRINTS Pathogenesis-related protein signature 22 34 IPR001938 -
Bach4g00167 220 PRINTS Pathogenesis-related protein signature 113 129 IPR001938 -
Bach4g00167 220 PRINTS Pathogenesis-related protein signature 41 50 IPR001938 -
Bach4g00167 220 PRINTS Pathogenesis-related protein signature 63 74 IPR001938 -
Bach4g00167 220 FunFam Thaumatin I 21 220 - -
Bach4g00167 220 ProSitePatterns Thaumatin family signature. 76 91 IPR017949 -
Bach4g00167 220 CDD TLP-P 23 220 - -
Bach4g00167 220 SUPERFAMILY Osmotin, thaumatin-like protein 21 220 IPR037176 -
Bach4g00167 220 PANTHER OS03G0233200 PROTEIN 12 220 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00167 Bach-Chr4 1116640 1117302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00167 4 220 Receptor kinase-like Gene Family AT5G38280 35.510 2.02e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00167 - - mnt:21412340 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00167 4 1116640 1117302 Bach4g00168 4 1120564 1121226 BWGD
Bach4g00167 4 1116640 1117302 Bach4g00167 4 1116640 1117302 ECH