Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00123 ATGTGGTTTTTGGGTTGGAAAGGGGCATCTGGATTCTCGGCCTCTTCCACGGCAGAGCAAGTGACACGAGGAATCGACGGGGACGGTCTCACCGCCATTGTTACAGGAGCATCAAGTGGTCTTGGTCTGGAGACCACCCGGGTTCTTGCACTGCGGGGTGTCCATGTTGTTATGGCAGTAAGGAATGTGGAAGCTGGTAGGAACATCAAACAAATAATAGTTAAGGAAATTCCCACTGCTAAAATTGATGTTATGGAGTTAGATCTTAGCTCCATGCCTTCTGTGAGGAAATTTGCTGCAGATTATACTTCATCTGGTCGTCCCCTCAATATTCTAATTAACAATGCAGGAGTGATGGCAACTCCATTCATGATTTCCCAAGACAACATTGAATTTCAATTTGCAACCAATCATTTAGGTCATTTTCTATTGACAAATCTTCTGTTGGAAACTATGAAACAAACTGTACGTGAATGCAACAAGGAGGGAAGGATAGTTACTGTATCATCAGAGGCACACAGATTTGTATATCGTGAAGGGATTCGTTTTGATAAGATCAATGATGAATCAGGATACCATAGTTATTTCGCTTATGGACAATCAAAGCTTGCTAATATTTTACATGCAAATGAACTTGCAAGACGCTTGAAGGAAGAAGGAGTGAAAATAACTGCTAACTCCCTCCATCCTGGATCAGTTATTACAAATATTCTGCGTTACCATAATTATATTAATGCTGCTGCCAATATGGTTGGGAAGTACTTTCTTAAGAGTGTTGAGCAGGGAGCTGCAACTCAATGTTATGTGGCATTGCATCCGCAAGTCGAGGGAGTATCTGGTGAATATTTCATGGATAGCAACAAGGCAAACCCAAGCTCTCTGGCTATAGATTCGGAGTTGGCAAAAAAGCTTTGGGAATTCAGCTCGAGCCTGACCAATCTAAAGTAGCTTTCTTTGTCTGAATTTGAGAATCCTTCTTGTCAGAGAGAAAACCGTACAGCACAAGAAATATCAGTAAAGTAGACTTTTCTAGTGGTA 1038 0.4152 MWFLGWKGASGFSASSTAEQVTRGIDGDGLTAIVTGASSGLGLETTRVLALRGVHVVMAVRNVEAGRNIKQIIVKEIPTAKIDVMELDLSSMPSVRKFAADYTSSGRPLNILINNAGVMATPFMISQDNIEFQFATNHLGHFLLTNLLLETMKQTVRECNKEGRIVTVSSEAHRFVYREGIRFDKINDESGYHSYFAYGQSKLANILHANELARRLKEEGVKITANSLHPGSVITNILRYHNYINAAANMVGKYFLKSVEQGAATQCYVALHPQVEGVSGEYFMDSNKANPSSLAIDSELAKKLWEFSSSLTNLK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00123 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 287 IPR036291 -
Bach4g00123 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Bach4g00123 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Bach4g00123 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Bach4g00123 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Bach4g00123 315 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Bach4g00123 315 Gene3D - 25 315 - -
Bach4g00123 315 Pfam short chain dehydrogenase 31 173 IPR002347 -
Bach4g00123 315 PANTHER RETINOL DEHYDROGENASE 10 312 - -
Bach4g00123 315 CDD retinol-DH_like_SDR_c_like 29 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00123 Bach-Chr4 843053 846330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00123 33 291 Acyl Lipid Metabolism Gene Families AT1G63380 25.818 1.67e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00123 - K19329 gmx:121174911 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00123 4 843053 846330 Bach4g00123 4 843053 846330 ECH