LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g00098	ATGAGCGGCAACCAAGTTCAATTATTGTCAAAGATAGCCACTGGCGACGGACATGGTGAAAACTCCCCATTCTTTGATGGCTGGAAAGCATATGAAAACGACCCTTTCCATCCCACCAAGAATCTCCATGGAGTTATCCAAATGGGTCTCGCTGAAAATCAGCTTTCTTTTGATGTGATTGAAGAATGGGTAATGAATAATCCGAAGGCCTCCATTTGCACATTAGAAGGAGTACGTGATTTCAGCGCCATAGCTAACTTTCAGGACTATCATGGCTTACCGGAATTTAGAAATGCTGTGGCTAAACTCATGGCGAGAACCAGAGGAAACAGAGTGACATTCGACCCTGACCGCATTGTTATGAGCGGTGGAGCAACTGGCGCACACGAGGTCACTGCCTTTTGTTTGGCTGATCCCGGTGATGCTTTTTTGGTTCCCACTCCTTACTATCCAGGTTTTGACCGGGATTTGAGGTGGAGAACAGGAGTACAACTTGTTCCAATTATCTGCGAGAGCTCAAATAATTTCAAAGTGACAAAGAAAGCATTGGAAGCTGCCTTTGAGAAAGCAAGACAGGATAACATCAGGGTTAAAGGCGTGCTTATTACCAACCCATCAAACCCATTAGGGACTATAATGGATAGCGAAACGCTAAGAACTCTAGTGAGGTTTGTTAATGAGAAGAGCATTCACCTGATTTGTGATGAAATATATGCTGCTACAGTTTTCTGTAAACCTGACTTCACAAGCATCGCTGAGATAATTGAGGAAGAAGACATTGATTGTAACCTTGATCTCATCCACATTGTTTATAGTCTTTCTAAGGATATGGGGTTCCCTGGTTTCAGAGTTGGCATCATATATTCTTACAACGACGCCGTTGTGAACTGTGCTCGCAAGATGTCAAGCTTTGGATTAGTTTCCACACAGACCCAACATCTTATAGCATCAATGCTATCCGATGATGAGTTTGTGGAACGATTCCTTGCAGAAAGCGCAAAGCGACTGGCCAAAAGGTACAGGATTTTCACTAGGGGACTTTCCCAAGTTGGCATAAACTGCTTGAAGAGTAATGCTGGTCTCTTTTTGTGGATGGATTTGCGTAGTCTTCTCAAGAGTCAGACATTTGAAGCAGAAATGGAATTGTGGCGAGTGATCATTAACCAAGTTAAGATCAATGTATCGCCTGGTTCTTCTTTCCATTGCTCTGAACCGGGCTGGTTCAGAGTATGCTATGCCAACATGGATGATAGGGCCGTTGAAATTGCTTTGACAAGAATCCGCAACTTTGTGCTTCAAAATATGGAGGCCAAGGGTCCTGTCAAGAAACAGTGTTGGCAGAGCAACTTAAGGCTAAGCTTCTCATCCAGAAAGCTAGATGATATCTCGATGTCACCGCACTCCCCGATACCTCATTCACCTTTGGTTAAAGCCACAACTTGA	1443	0.438	MSGNQVQLLSKIATGDGHGENSPFFDGWKAYENDPFHPTKNLHGVIQMGLAENQLSFDVIEEWVMNNPKASICTLEGVRDFSAIANFQDYHGLPEFRNAVAKLMARTRGNRVTFDPDRIVMSGGATGAHEVTAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPIICESSNNFKVTKKALEAAFEKARQDNIRVKGVLITNPSNPLGTIMDSETLRTLVRFVNEKSIHLICDEIYAATVFCKPDFTSIAEIIEEEDIDCNLDLIHIVYSLSKDMGFPGFRVGIIYSYNDAVVNCARKMSSFGLVSTQTQHLIASMLSDDEFVERFLAESAKRLAKRYRIFTRGLSQVGINCLKSNAGLFLWMDLRSLLKSQTFEAEMELWRVIINQVKINVSPGSSFHCSEPGWFRVCYANMDDRAVEIALTRIRNFVLQNMEAKGPVKKQCWQSNLRLSFSSRKLDDISMSPHSPIPHSPLVKATT	480

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g00098	480	Gene3D	-	68	321	IPR015421	GO:0003824
	Bach4g00098	480	CDD	AAT_like	86	428	-	-
	Bach4g00098	480	SUPERFAMILY	PLP-dependent transferases	18	431	IPR015424	-
	Bach4g00098	480	Pfam	Aminotransferase class I and II	46	427	IPR004839	GO:0009058\|GO:0030170
	Bach4g00098	480	PANTHER	BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED	10	431	-	-
	Bach4g00098	480	ProSitePatterns	Aminotransferases class-I pyridoxal-phosphate attachment site.	272	285	IPR004838	GO:0003824\|GO:0009058\|GO:0030170
	Bach4g00098	480	Gene3D	Aspartate Aminotransferase, domain 1	34	426	IPR015422	GO:0003824
	Bach4g00098	480	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	266	290	-	-
	Bach4g00098	480	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	48	74	-	-
	Bach4g00098	480	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	118	138	-	-
	Bach4g00098	480	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	298	321	-	-
	Bach4g00098	480	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	140	161	-	-
	Bach4g00098	480	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	194	218	-	-
	Bach4g00098	480	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	81	97	-	-
	Bach4g00098	480	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	230	253	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g00098	Bach-Chr4	682151	684251	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g00098	K20772		-	qsa:O6P43_024135	792.341

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach4g00098	4	682151	684251	Bach4g00098	4	682151	684251	BWGD
	Bach4g00098	4	682151	684251	Bach4g00098	4	682151	684251	ECH