Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00043 GGCCTCTCGCGTCAGTAATTTGGCCGCCTATAAATTCGCCAACTTTTCTTTTTCCTGTTGTGATTTCAAGCTATCATCACATTCACAACAGTCTTCATCTTTTCGTTTCTCTTTTCCTCAACGATTTTATCATGGTGACCAAGACCGTTCTCGTCACAGGTGGTGCCGGTTACATTGGCAGCCACACCGTTCTCCAACTCTTGCTAGGCGGTTTCAAAGCCGTCGTCGTCGACAACCTTGATAATTCTTCTGAAATTGCTATTCAGAGAGTCAAAGAGCTCGCTGGCGAGTTCTGCAATAATCTTTTCTTCCATAAGGTAGACCTCAGGGACAGACCCGCACTCGAACAAATTTTTGCTTCGACTCAATTTGATGCTGTCATACATTTTGCTGGATTGAAAGCAGTTGGTGAAAGCGTGCAGAAACCATTACTCTACTACAACAACAACTTGATTGGGACAATTACGCTGTTGGAAGTCATGTCTGCTCATGGTTGCAAGAAGCTGGTGTTCTCATCATCAGCCACTGTATATGGCTGGCCAAAGGAGGTTCCATGCACAGAAGAGTTCCCACTATCAGCAATGAACCCATATGGGCGAACCAAGTTATTCATTGAGGAAGTCTGTCGTGATATCTACTGCGCAGACTCGGAATGGAAGATAATGTTGTTGAGATACTTCAACCCAGTTGGAGCACATTCTAGTGGTCATATTGGTGAGGATCCTCGTGGGATTCCTAATAATCTCATGCCATTTGTTCAGCAAGTAGCAGTGGGCAGACGCCCTGCACTGACAGTTTTTGGAAATGATTATAATACAATTGATGGTACTGGGGTGCGTGATTATATTCATGTTGTTGATTTAGCAGATGGGCACATTGCTGCATTGTGTAAGCTTGATGATTCTAACATAGGTTGTGAGGTATACAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTAAAAGCTTTCGAAAAGGCATCTGGAAAGAAAATTCCACTTGTGATGGCCGATCGGCGACCTGGTGATGCTGAAATTGTTTATGCATCAACAGAGAAAGCAGAAAGGGAACTTAATTGGAAGGCAAAATACGGCATTGATGAGATGTGTCGTGATCAATGGAATTGGGCCAGCAAAAATCCCTATGGCTATGGATCACAGGACTCTACCAATTAATTAATGTTGATAACTGTCATATATAGGTTCTCTGATAGGGTTTACTGAACCTAGTCACACCATAGATCATCTAAATTAGGCTCTCTAAGCTTTGTTGGGAATGTATAGCCGTCAAATAATTAGTAATATGATTTTTAGTTACACGCGCAGATAGGAAGACATTTACTGTAATTCATTCAAAATTCAATAAGGTCATATTTCGCCATACAAGTTTTATGTATCGTCTTTGATTGAAGTCGTCATTAGCAGAAACATCATAATCTTGGGGTACGCCTTTTTCTTT 1464 0.418 MVTKTVLVTGGAGYIGSHTVLQLLLGGFKAVVVDNLDNSSEIAIQRVKELAGEFCNNLFFHKVDLRDRPALEQIFASTQFDAVIHFAGLKAVGESVQKPLLYYNNNLIGTITLLEVMSAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAMNPYGRTKLFIEEVCRDIYCADSEWKIMLLRYFNPVGAHSSGHIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGNDYNTIDGTGVRDYIHVVDLADGHIAALCKLDDSNIGCEVYNLGTGKGTSVLEMVKAFEKASGKKIPLVMADRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYGSQDSTN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00043 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 3 346 - -
Bach4g00043 349 Gene3D - 194 335 - -
Bach4g00043 349 PRINTS Nucleotide sugar epimerase signature 301 318 - -
Bach4g00043 349 PRINTS Nucleotide sugar epimerase signature 32 48 - -
Bach4g00043 349 PRINTS Nucleotide sugar epimerase signature 236 251 - -
Bach4g00043 349 PRINTS Nucleotide sugar epimerase signature 262 277 - -
Bach4g00043 349 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Bach4g00043 349 Gene3D - 6 275 - -
Bach4g00043 349 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Bach4g00043 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Bach4g00043 349 FunFam UDP-glucose 4-epimerase 6 199 - -
Bach4g00043 349 FunFam UDP-glucose 4-epimerase 4 278 346 - -
Bach4g00043 349 NCBIfam UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00043 Bach-Chr4 293278 297221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00043 5 319 Miscellaneous Gene Families AT4G00110 27.108 2.36e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00043 K01784 - qsa:O6P43_034348 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00043 4 293278 297221 Bach4g00043 4 293278 297221 BWGD
Bach4g00043 4 293278 297221 Bach4g00043 4 293278 297221 ECH