LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach4g00026	ATGGCGTCGTCTTTACATAATTCAGTTCCAATTTCATCTTCTTGTTCGCTCAACATTCCATGTTGCACTAAAATTTTCCCCAGTTTCCCATCTTGTCCAATCATCAGATTTTCTCACAGCCTTACGCCTGTCTTTACAAAATCAAGATCGATTTTTTACCGAAAGAAAAACAAGACCGAATTTTCCGTCCAAGCACAAACCCTGGACTTCTCAGATTCCTTTTTTGAAGGAGGATTCGGGTCGGACGACGACCCTACTTCTATCGGATCGGGGTTTACAGCAGTGGAGGAGAAGGAGGAACCACAATGCCCGCCTGGACTCAGACACTACGAGACAATGGCGGTTCTAAGGCCTGATATGTCCGAGGATGAGCGACTCGCACTGACCCAGAGATACGAGGAGCTGCTTGTTGCTGGAGGTGGCATGTACGTAGAGGTTTTTAACAGAGGAGTTATCCCGCTAGCATATAGCATCAAGAAGAAAAACAAGGCCGGGGAGACCAACACTTATTTGGATGGCATCTATCTCCTATTCACCTACTTTACGAAGCCCGAGTCGATGGGCATTCTTGAGGAGACACTGAATGCTGATGACGATGTCATCCGTTCTACGAGTTTCAAGGTTAGGAAACGGAAGTATTAGTTTCTTTTCAGCACTTGAGTAGCTCTGAGAGAAATATGATTAGCGATGTTGTATTATTATCATACTATGTAATATCATATGTCAATCCTAGAATCTATCTATCTATCTATCTAAAAGAAGTTGAGGCTGGTTTGAGATCTGTATTTGCTTGGAATGTTGGAACACGTCCTGTTAACCCCCATTACTGGTCAAATAGATCCTAATTGAATCAACTTGAGATGATAGTTTG	871	0.4305	MASSLHNSVPISSSCSLNIPCCTKIFPSFPSCPIIRFSHSLTPVFTKSRSIFYRKKNKTEFSVQAQTLDFSDSFFEGGFGSDDDPTSIGSGFTAVEEKEEPQCPPGLRHYETMAVLRPDMSEDERLALTQRYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPESMGILEETLNADDDVIRSTSFKVRKRKY	213

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach4g00026	213	Gene3D	-	106	213	IPR014717	-
	Bach4g00026	213	SUPERFAMILY	Ribosomal protein S6	107	211	IPR035980	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Bach4g00026	213	CDD	bS6_chloro_cyano	107	208	-	-
	Bach4g00026	213	PANTHER	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6	98	213	IPR000529	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Bach4g00026	213	Hamap	30S ribosomal protein S6 [rpsF].	107	210	IPR020814	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Bach4g00026	213	Pfam	Ribosomal protein S6	109	207	IPR000529	GO:0003735\|GO:0005840\|GO:0006412\|GO:0019843
	Bach4g00026	213	FunFam	30S ribosomal protein S6 alpha, chloroplastic	106	213	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach4g00026	Bach-Chr4	217882	220392	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach4g00026	K02990		-	gmx:100305490	290.041

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach4g00026	4	217882	220392	Bach4g00026	4	217882	220392	ECH