Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01998 ATGGCCGCCCAAAACTTGATACCCTTTTTAGTTCTTATCATCTTCTCCGTGTTTGTGAAAAGTTCTGAATCAATTTCTTCAGATAATTTATCACCAAGATACTCACGGCGGTTTCTACCTTATCAAGGAGTTAGAGCTGCATATTGGCCTTCATTTAATGACTTTCCAGCCTCTTCCATTGACACCACGTACTTCACCCACATTTACTATTCATTCCTCTTACCAGATCCACGCACGTACAAGATCAATATCACCGAATTGGACCAAGCAAAGATACCCGAGTTTATCAACGGCCTCCGTTACAAATACCCGCCAGTGAAGACTCTGTTCTCAATTGGAGGAGGTGGCTACGACCCAAATGTGTTCGCAGCCATGGCAAAAACCCAGCGAACCCGAGGAATCTTCATCAATTCTACTATCCAAGTGGCTCGACAATATGGGTTCGATGGGATTGACCTGGACTGGGAATTCCCGGCGAACAAGAAAGACATGGCTAATCTTGCTCTGTTATACAGAGAATGGTATGAAGCGCTGGCTTTGGATGCTAAGATTCACCGAAAGCCACGCTTACTTTTGACATCTGCAGTGTACTATGCCTCAATAATGGTGAGACTTGGAAATGAGCCAAGATCGTATCCAGCTGAAGCGATTCGGAAATATTTGGACTGGGTTAGCCCCATGTGCTATGACTACCATGGGTCCTCCTGGGAAAATTTCACTGGGGTGAACGCAGCACTCTACGATCCCAATAGCAACATAAGCACCGACTATGGAATTGGGTCGTGGATCAAATCCGGTGTGCCACCCGACAAACTTGCAATGGGTTTGCCCTTATATGGGCGCACGTGGGAGCTCAAGCATCCGAATGTCCACGGGATTGGGGCACCCGCGGTTGGGATTGGGCCAGGGAATGATGGTACTATGGATTATAACCGTGTAATTGAGTTTAACCAGGAGAATTCTGCTAACGTTGTATATGATGCAGTAAGCGTCTCCTATTACTCTTACGTAGGGGATTCTTGGATCAGTTACGATGATGTTCGCTCCATAAAAAAGAAGGTTCAATTCGCTCGCTCACTGGCTTTACGTGGTTATTTCTTTTGGGCCCTTGGCCAGGACAAGGATTGGACCATCTCAAGACAAGCTTCCTATGCATGGGGACACTCACGGCGCAAATGA 1179 0.4656 MAAQNLIPFLVLIIFSVFVKSSESISSDNLSPRYSRRFLPYQGVRAAYWPSFNDFPASSIDTTYFTHIYYSFLLPDPRTYKINITELDQAKIPEFINGLRYKYPPVKTLFSIGGGGYDPNVFAAMAKTQRTRGIFINSTIQVARQYGFDGIDLDWEFPANKKDMANLALLYREWYEALALDAKIHRKPRLLLTSAVYYASIMVRLGNEPRSYPAEAIRKYLDWVSPMCYDYHGSSWENFTGVNAALYDPNSNISTDYGIGSWIKSGVPPDKLAMGLPLYGRTWELKHPNVHGIGAPAVGIGPGNDGTMDYNRVIEFNQENSANVVYDAVSVSYYSYVGDSWISYDDVRSIKKKVQFARSLALRGYFFWALGQDKDWTISRQASYAWGHSRRK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01998 392 CDD GH18_plant_chitinase_class_V 44 379 - -
Bach3g01998 392 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 148 156 IPR001579 GO:0004553|GO:0005975
Bach3g01998 392 Pfam Glycosyl hydrolases family 18 46 373 IPR001223 GO:0005975
Bach3g01998 392 SUPERFAMILY (Trans)glycosidases 44 381 IPR017853 -
Bach3g01998 392 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 43 389 IPR001223 GO:0005975
Bach3g01998 392 SUPERFAMILY Chitinase insertion domain 279 344 IPR029070 -
Bach3g01998 392 Gene3D - 278 344 IPR029070 -
Bach3g01998 392 FunFam Class V chitinase CHIT5b 278 344 - -
Bach3g01998 392 PANTHER CHITINASE 47 384 - -
Bach3g01998 392 SMART 2g34 43 373 IPR011583 GO:0008061
Bach3g01998 392 Gene3D Glycosidases 58 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01998 Bach-Chr3 27718373 27719736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01998 1 386 Glycoside Hydrolase AT4G19810 37.984 3.04e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01998 K01183 - qsa:O6P43_015746 500.36