Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01984 GTCCACTCTCTCACTTGTCTGTCTGCAACAGCTGAAATGCGTTATGCCCTTCCTTTCGACTCTAAGGAGATCTTCACCATGCATCCGCCAATTCATAATCCAACGGCTCTGGATCCGCCAATCTTCAACTGCGCCTTCTTCTTCACCATCGCTGAACAATAGCCGGAAGTATTATTGTAACCAACGCCGTAATCCAGATTCTGGGTCGTCTCTGAAATGGGTTCCGTCAATTTTCGTCGGCTCGAGTCTAGGGCTTATATGTTGGTTTTCTGTTTCCAATTCCGATTTTGAGTCTTCCTTGTTAAAGAGTTACTCATCTTTTACGGACTGGTCAACTGCGAGTTCTGAGACTGCATTCGATGATGTACGGCGTAGTTCACGGTCATTGCTTGGAAAATTATCCTTGCCGGAAATTAATGACAGTTTCCTTTTTGGAGATGCTTACAGGAGAAAGATTTTCTTCAACTACGAGAAGCGCATACGGCTGCGAAGTCCTCCGGAAAAGGTTTTTGAGTACTTTGCATCTTGTCGTACACCAGAAGGAGAACTACTCATGAAACCAGCAGACCTAATGAGAGCCGTTGTTTCTGTTTTCCCTCCATCTGAATCCCACCTCGTTAGAGATGGATACTTAAGAGGAGAAAGGAGTCCCGGTTATGTACGCTGCGCTCCTTCAGAATTTTTTATGCTTTTTGATGTCAACAACGACGGGCTTATATCTTTTAAAGAGTATATATTTTTTGTAACGCTACTCAGCATACCAGAATCAAGCTTTTCTGTGGTATTTAAAGTGTTCGACAGGAACAATAACGGGGAGATAGACAAGGAAGAATTCAAGAATTTGATGAAATTCATGCGATCTCATAATAGACAAGGTGCTAACCACAGAGATGGACTGCGAATTCGCCTAAAGGTCCATGATTCGGTAGAAAACGGAGGGCTGGTGGAACACTTCTTTGGTAAAGATGGAAAGGGACGCCTTAAACATGATAAATTTGTAGAATTTATGAGAGACTTACACAATGAAATTATAAGGCTGGAGTTTGCTCATTATGACTACAAATCACGAGGAACCATATCAGCTAAGGACTTTGCACTCTCCATGGTTGCTTCTGCCGACATGAGTCATCTACACAGGTTGCTTGATCGGGTGAAAGAATTGAACAACGATCCGTCTCTTAGAGATGCACGCATCACATTCGACGAGTTCAAAAGTTTGGCAGATCTACGAAAAAAATTGTTACCATTTTCTTTGGCCCTTTTCTGTTTTGGAGAAGTAAATGGCCTGTTAACAAGAGATGATTTTCAGCGAGCTACATCACAGGTGTGCGGCATATCTCTCTCTGACATTGTGGTTGACATTGTTTTCCATTTGTTTGACACAAATCGGGATGGAAACCTAAGTTCAGACGAGTTTGTGAGAGTTCTACAAAAGCGTGAAAAGGACATAGCACATCCTTCGGAGGCAGGAATCCTTGGTTTCATTTCTAGCTGCTGGAACTGTGCAGATAACCTGTCATCTTCAAGGTTGCTTTCCTGA 1540 0.4279 MPFLSTLRRSSPCIRQFIIQRLWIRQSSTAPSSSPSLNNSRKYYCNQRRNPDSGSSLKWVPSIFVGSSLGLICWFSVSNSDFESSLLKSYSSFTDWSTASSETAFDDVRRSSRSLLGKLSLPEINDSFLFGDAYRRKIFFNYEKRIRLRSPPEKVFEYFASCRTPEGELLMKPADLMRAVVSVFPPSESHLVRDGYLRGERSPGYVRCAPSEFFMLFDVNNDGLISFKEYIFFVTLLSIPESSFSVVFKVFDRNNNGEIDKEEFKNLMKFMRSHNRQGANHRDGLRIRLKVHDSVENGGLVEHFFGKDGKGRLKHDKFVEFMRDLHNEIIRLEFAHYDYKSRGTISAKDFALSMVASADMSHLHRLLDRVKELNNDPSLRDARITFDEFKSLADLRKKLLPFSLALFCFGEVNGLLTRDDFQRATSQVCGISLSDIVVDIVFHLFDTNRDGNLSSDEFVRVLQKREKDIAHPSEAGILGFISSCWNCADNLSSSRLLS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01984 498 Gene3D - 84 284 - -
Bach3g01984 498 ProSitePatterns EF-hand calcium-binding domain. 446 458 IPR018247 -
Bach3g01984 498 Gene3D - 300 403 - -
Bach3g01984 498 CDD EFh_MICU 244 465 - -
Bach3g01984 498 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 40 489 IPR039800 GO:0005509|GO:0006851
Bach3g01984 498 SUPERFAMILY EF-hand 330 465 IPR011992 -
Bach3g01984 498 SUPERFAMILY EF-hand 212 464 IPR011992 -
Bach3g01984 498 SMART efh_1 209 237 IPR002048 GO:0005509
Bach3g01984 498 SMART efh_1 437 465 IPR002048 GO:0005509
Bach3g01984 498 SMART efh_1 243 271 IPR002048 GO:0005509
Bach3g01984 498 ProSitePatterns EF-hand calcium-binding domain. 252 264 IPR018247 -
Bach3g01984 498 ProSiteProfiles EF-hand calcium-binding domain profile. 239 274 IPR002048 GO:0005509
Bach3g01984 498 ProSiteProfiles EF-hand calcium-binding domain profile. 433 468 IPR002048 GO:0005509
Bach3g01984 498 Gene3D - 411 474 - -
Bach3g01984 498 Pfam EF hand 247 269 IPR002048 GO:0005509
Bach3g01984 498 Pfam EF-hand domain pair 414 465 IPR002048 GO:0005509
Bach3g01984 498 Pfam EF hand 213 230 IPR002048 GO:0005509
Bach3g01984 498 CDD EFh 212 269 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01984 Bach-Chr3 27597706 27601786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01984 53 430 EF-hand Containing Proteins AT4G32060 65.885 7.35e-173 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01984 K22827 - qsa:O6P43_019470 687.952