Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01869 ATGTCGACAGAAGCAGCACCTTATGAACCCAAAAATATTCTCCTAACTGGTGCAGCTGGTTTCATTGCCTCCCATGTCACCACCAGGCTAATCAAAAACTACCCTCAATACAAGATCGTAGTTCTTGATAAACTAGATTATTGCTCTACTTTCAAGAATTTGGAATCTTGCCCTTTATCACCAAACTTCAAGTTTATTAAGGGTGATATTGCTAGCGTTGATATTGTGAATCACCTTTTGATAGAAGAGGATATAGATACCATTATGCACTTTGCTGCTCAAACCCATGTAGATAATTCTTTTGGTAACTCCATGGAATTCACCTACAATAACGTATATGGCACCCATGTAATCCTTGAAGCCTGCAGGGTCACCAACTGTGTAAAAAGGTTCATTCATGTTAGCACAGATGAAGTTTATGGTGAGACTGACTTAGAAACTGATATCGGCAATCATGAGACAAATCAACTTCTTCCCACCAATCCTTATTCTGCAACAAAAGCAGGAGCAGAAATGCTGGTCATGGCTTATCACAGGTCTTATGGTCTTCCAGCCATAACTACTCGAGGCAATAATGTCTATGGTCCAAACCAATACCCTGAAAAGCTTATCCCAAAATTCATTCTTTTGGCCATGAAAGGTGAGAAGTTGCCAATCCATGGAAATGGCTCAAATGTGAGGAGCTATCTTTATTGTGCAGATGTTGCAGAAGCATTTGATGTCATACTTCATAAAGGAATGGTTGGCCATGTCTACAATATTGGCACTAAGAAGGAGAGGAGTGTACAAGATGTTGCACAAGATATTTGCAACCTCTTCAAATTAGATCCTAAAGAAGTTATTGAGTTTGTTCAAGATAGGCCTTTCAATGACAAGAGGTATTTTCTGGATGATCAAAAGCTGAAGAAGCTTGGATGGAAGGAGAGCACTCCTTGGGAAGAAGGACTTAAGATGACAATTGATTGGTATAAAAAAAACCCAGATTGGTGGGGTGATGTATCCACTGCTTTACACCCACATCCACGTTTCTCAGCAATGCACCGTGCTGATGAAGCTGCTTGGAGTTTTCAGTATGGATATTCAAGATTGGCAAGGTCATTTACTGACGTTAATCGCAATTCAGGGGGACTGAAATTCTTGATTTATGGGAAAACTGGTTGGATAGGAGGATTGTTAGGGAAGCTTTGCAATGAAGCGAAAATAGCTTGGGAGTATGGGAAAGGAAGACTTGAAGACAGAAAATCACTGTTGGCTGATATAAGCAGAATTAAGCCAACACATGTGTTAAATGCATCTGGTGTTACCGGAAGGCCTAATGTGGATTGGTGTGAATCACACAAAGTTGAAACAATTAGGACAAATGTTGTTGGAACATTAACTCTGGCAGATGTTTGCAAGGAACAAGGGATTCATATGACAAATTTCGCAACTGGTTGCATATTTGAATATGACAAGGAGCATCCTCTTAATTCTGGTATTGGCTTCAAAGAGGAGGATAAGCCAAACTTCACTGGTTCCTTCTATTCAAAGACCAAAGCCATGGTGGAGGAACTTCTGAAAGAATATGAAAATGTCTGCACACTCAGAGTTAGAATGCCAATATCATCAGATCTCAACAACCCAAGGAACTTCATCACAAAGATTTCTCGTTATAACAAGGTGGTAAACATACCAAATAGCATGACAGTGTTAGATGAGCTTCTACCTATATCGATTCAGATGGCTAAGAAGAAGCTAACAGGGATCTGGAACTTCACCAACCCAGGTGTAATAAGCCACAATGAGATTTTGCAAATGTACAGAGATTACATAGACCCAGAATTCAAATGGCAAAACTTTGATTTGGAAGAACAGGCAAAGGTAATAGTTGCTCCCAGGAGTAACAATGAACTGGATGCATCCAAACTCAAAAAGGAGTTTCCAGGTTTGTTGTCCATCAAAGATTCTGTCATCAAGTTTGTCTTTGAGCCTAACAAGAAAACTTGA 1986 0.3978 MSTEAAPYEPKNILLTGAAGFIASHVTTRLIKNYPQYKIVVLDKLDYCSTFKNLESCPLSPNFKFIKGDIASVDIVNHLLIEEDIDTIMHFAAQTHVDNSFGNSMEFTYNNVYGTHVILEACRVTNCVKRFIHVSTDEVYGETDLETDIGNHETNQLLPTNPYSATKAGAEMLVMAYHRSYGLPAITTRGNNVYGPNQYPEKLIPKFILLAMKGEKLPIHGNGSNVRSYLYCADVAEAFDVILHKGMVGHVYNIGTKKERSVQDVAQDICNLFKLDPKEVIEFVQDRPFNDKRYFLDDQKLKKLGWKESTPWEEGLKMTIDWYKKNPDWWGDVSTALHPHPRFSAMHRADEAAWSFQYGYSRLARSFTDVNRNSGGLKFLIYGKTGWIGGLLGKLCNEAKIAWEYGKGRLEDRKSLLADISRIKPTHVLNASGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCKEQGIHMTNFATGCIFEYDKEHPLNSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYENVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIQMAKKKLTGIWNFTNPGVISHNEILQMYRDYIDPEFKWQNFDLEEQAKVIVAPRSNNELDASKLKKEFPGLLSIKDSVIKFVFEPNKKT 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01869 661 FunFam UDP-glucose 4,6-dehydratase 13 216 - -
Bach3g01869 661 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 8 342 - -
Bach3g01869 661 CDD dTDP_GD_SDR_e 11 328 IPR005888 GO:0008460|GO:0009225
Bach3g01869 661 Gene3D - 369 661 - -
Bach3g01869 661 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 376 639 IPR036291 -
Bach3g01869 661 Gene3D - 204 326 - -
Bach3g01869 661 Pfam RmlD substrate binding domain 378 549 IPR029903 -
Bach3g01869 661 CDD dTDP_HR_like_SDR_e 378 640 - -
Bach3g01869 661 Gene3D - 13 317 - -
Bach3g01869 661 Pfam GDP-mannose 4,6 dehydratase 14 319 IPR016040 -
Bach3g01869 661 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 339 IPR036291 -
Bach3g01869 661 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 368 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01869 Bach-Chr3 26848382 26850459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01869 12 323 Miscellaneous Gene Families AT1G02000 26.269 1.09e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01869 K12450 - gmx:100776241 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01869 3 26848382 26850459 Bach3g01869 3 26848382 26850459 ECH