Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01708 ATGCATGTTACAGGGGATCTAGGGTTTTCGAGCCTGGTCCTTTTGGTGGTTTGTTTGGCAATACCCATAATCGTGTTTGTAATTCGTCGGAAATGGCACCATGCAGTGGCCAGGAAAGAGGAGATCAAGAGGCTTTTGATTTTGGCCTCCGAGGAGGCAGCTAGGGCCGAGCTCGAGGCCTCCTATGCGTACGGCACCGTTTCATTTACTAAGAATAATCAATGTGCAGTGTGCTATTGCCCCACCACAACGCGGTGTGTCCGGTGCAAAGCGGTTCGCTACTGTTCTGGTAAGTGCCAAATTATTCATTGGCGTCAAGGTCACAAGGAAGAATGCTGTCCTCCCAGCACCACTCACCGGGATGATGATGCTGTAAGGGATTTTGGCAAGGCAGCAGGAGAACAAGACCGCCTTGAAATTCATTGTGAGCTTAGTGATTTGGACAAGAAGGTAGCAGAACAAGATCACTTTGGAATTCACGTTGAGAACTCCAAGATTGAGGGCACACATTCTGAACTATCCTCTATGAAACCCTCATTAATTGATATTAGTTGTTCTCCCGATGTTTCATGTGGAAGGGATGACAATATTAGAGTTGAACCTCTTGCTGAGGGAAATATAGCAGATTCTAATTCTGAAACATCTAGTAACTCATTTTCTGGATTCTCTGCTTCCAATACTTCTAGTGAATCATCTGATGATGCCTCTGTCGGCGAGAGTGTCATCTCAAACGAGCATGAGAAATCAGAACATGCTTTTGTTGATCCCACACTTCACATGCCAGATACTTGTTCAAGTGATAATAGTGTGGGTATAACCATGTCATCATCACCAAAGTTTGCTACTTTGCTTGATTCTATAGATGGTTTTTCTACAATGCATAAATTAAATAAAATTAGACCTGGTTTTAGCGAAGAGAGTAAGCTTGCATCCAATGGTGCTTCAGGGTTGAGAACGCAAGGGGAAATGAATGAGCATTGTATCGTGTCTTCTGGTTTCTGGAATAAAGCTCTTGATATTAGGGGGTCTACAGGCAATGCTGACGGTGACTCTCTTCCATCCCATGCCAATAAATCCGCTGGCAATAAAAAATCTGAATCTGGTTCCTCCCTTTCCTTTTCATTCCAAACCATGGCTCCCTTAGATGTGCGAGATCCTGAGGCAAGAAGGTCTTTCTCTGAGTATTCTTTTCTGAACTCTGTCAAGAACAATATGCCAAGTGCAGGATCGGTATTACCAGAGAATGACTCCACGGAGTCTTCCAAAATGAGGAGTTCATCCTCCATTAACAGCAAAGGGTCCGATGTCTTGAATTCTGATACTACCAGTCATTCTGGTCAGTTGGAGTCTAGATCTTATGTCCGTCAATCAGTAGAGTCAAAGGCTTCAAATTATGTTGTGGATGACCCAGGCAATTCACATCTGTTGAAGTCTGTTGATGTTATAGGTTTGTCACGTGCATTTGCTGATGCTCAGTTAGATTCTAGAACTGAAGAGCAGACGCATTCTAGTACAAGATTTGTGAATAATGGTGTTCGATCCAGTACTGCTGCTTTATCTCAAGTTGCAAGCTGTTCCCCAAATTCTAAGAATGTCTTGAAAACATCTGTGTTGAAAGTTGTCGATCAGTTTAGAGGAACTAATCCGTCAAAAAGCTTCCTTCTAGCTGTTGGGAGTGATATTACTGGAAGATACAGTGACAAGGTTCTCTTTCCATATGACTTGTTTGTCAAGCTTTTTAATTGGAACAAGGTGGAATTGCGACCATTTGGTCTCATAAATTGTGGTAACAGCTGTTATGCTAATGCAGTACTCCAGTGCTTGGCATTTTCACCTCCCTTGACTGCTTATTTTCTTCAAGGACTTCACTCTAAAGCATGCGTGAAGAAAAAATGCTGTTTCACCTGTGAGTTTGAAAGTTTGGTTTTGAAGTCAAAAGAAGGGAAATCTCCACTCTCTCCTATGGGCATACTCTTGCAACTACAGAATATTGGGAGTCGACTTGGTAATGGGAGAGAAGAAGATGCACATGAATTTCTAAGGCATGTTATTGACACAATGCAATCTATTTGCCTTATGGAGGCTGGGATTAATGCATCAGGCTCATTGGAAGAGGAAACAACTTTAATGGATCTAACGTTTGGAGGCTACCTTCATTCAAAGATAAAATGCATGAAATGTGGGGGGAAGTCTGAGCGTCAGGAGAGGATGATGGATCTAACTGTTGAGATTGAAGGAGAGATAGCAACCCTGGAGGAGGCTCTACGACAATTTACAAAAACTGAGACTCTAGATGGAGAAAACAAGTACCTTTGTGTCAGGTGTAAATCTTACGAGAAAGCCAAGAAGAAAATGACAATTTCGGAGGCGCCAAATGTTCTTACTGTTGCATTAAAGAGATTTAAGTCTGGAAAATTTGGGAAGCTTAACAAGCCTGTTCAGTTTCCTGAAATACTTGATCTGGCACCTTTTATGAGTGGGACTAGCGACAAATCACCGATATACAGGCTCTATGGGGCAATTATTCACTTGGATGTCATGAATGCTGCATTTTCAGGTCACTACGTGTGCTATGTGAAGAATTTCCAGAACAAGTGGTTCAAGGTTGATGACAGCGTGGTCACAGCTGTTGAATTGGAGAGAGTCTTGCCAAAAGGAGCTTACATGCTACTTTATGCAAGGTGCTCACCAAGGGCTCCAAGATTAAGAAGGAACATGATAGTGTCTCCTGATTCAAGTAAAGCTATTAATGGAAAGATGACTATTTTGAAATCAAGATTTGTATCTGCAAATTCTGGTGCTGCTGAATATTTCGATGATTCAGTTTCTCCGGATGTTTCACCTACCTTAGACTCTTTCTATTCGAATTTTCATCGCCTGAGAAGGATTTTGGCAGAAGATTCATCGAGTGATAATTCATCCCTTATCAGCAGTAACTCTGATGAAGGTTCTTGCAGTACTGATAGCACCCGTGATTCAACCAGCACTGAGGACTTATCCGATTATATTTTTGGTGATTCAGGACGGGGCTGTAACAGCATTTGGAGGAATTCTGATTCTGACACTTCTTCATCCGCGTCTTCTCCAGATGCTCCTGGCTTGCAAACTCACAGAGATTCGCATATGGAGATAGACGGACGCTCTAATACCGGTATTAGCGGAGTGGTGGGAAGGGAGTATCTTGGGCATTCTGACACAAGTATGCAGCATAGGAAATTAGATAGTAGTAGTAGTAGTAGTAGATGTAGCGTCAGTAGTTTTAGGGAGACTGACCCTTTTCAGAGATTAGGATCCTAA 3297 0.424 MHVTGDLGFSSLVLLVVCLAIPIIVFVIRRKWHHAVARKEEIKRLLILASEEAARAELEASYAYGTVSFTKNNQCAVCYCPTTTRCVRCKAVRYCSGKCQIIHWRQGHKEECCPPSTTHRDDDAVRDFGKAAGEQDRLEIHCELSDLDKKVAEQDHFGIHVENSKIEGTHSELSSMKPSLIDISCSPDVSCGRDDNIRVEPLAEGNIADSNSETSSNSFSGFSASNTSSESSDDASVGESVISNEHEKSEHAFVDPTLHMPDTCSSDNSVGITMSSSPKFATLLDSIDGFSTMHKLNKIRPGFSEESKLASNGASGLRTQGEMNEHCIVSSGFWNKALDIRGSTGNADGDSLPSHANKSAGNKKSESGSSLSFSFQTMAPLDVRDPEARRSFSEYSFLNSVKNNMPSAGSVLPENDSTESSKMRSSSSINSKGSDVLNSDTTSHSGQLESRSYVRQSVESKASNYVVDDPGNSHLLKSVDVIGLSRAFADAQLDSRTEEQTHSSTRFVNNGVRSSTAALSQVASCSPNSKNVLKTSVLKVVDQFRGTNPSKSFLLAVGSDITGRYSDKVLFPYDLFVKLFNWNKVELRPFGLINCGNSCYANAVLQCLAFSPPLTAYFLQGLHSKACVKKKCCFTCEFESLVLKSKEGKSPLSPMGILLQLQNIGSRLGNGREEDAHEFLRHVIDTMQSICLMEAGINASGSLEEETTLMDLTFGGYLHSKIKCMKCGGKSERQERMMDLTVEIEGEIATLEEALRQFTKTETLDGENKYLCVRCKSYEKAKKKMTISEAPNVLTVALKRFKSGKFGKLNKPVQFPEILDLAPFMSGTSDKSPIYRLYGAIIHLDVMNAAFSGHYVCYVKNFQNKWFKVDDSVVTAVELERVLPKGAYMLLYARCSPRAPRLRRNMIVSPDSSKAINGKMTILKSRFVSANSGAAEYFDDSVSPDVSPTLDSFYSNFHRLRRILAEDSSSDNSSLISSNSDEGSCSTDSTRDSTSTEDLSDYIFGDSGRGCNSIWRNSDSDTSSSASSPDAPGLQTHRDSHMEIDGRSNTGISGVVGREYLGHSDTSMQHRKLDSSSSSSRCSVSSFRETDPFQRLGS 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01708 1098 MobiDBLite consensus disorder prediction 970 1001 - -
Bach3g01708 1098 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 289 898 - -
Bach3g01708 1098 MobiDBLite consensus disorder prediction 403 454 - -
Bach3g01708 1098 FunFam Ubiquitin carboxyl-terminal hydrolase 15 584 903 - -
Bach3g01708 1098 SUPERFAMILY HIT/MYND zinc finger-like 71 114 - -
Bach3g01708 1098 MobiDBLite consensus disorder prediction 1071 1092 - -
Bach3g01708 1098 Gene3D - 65 116 - -
Bach3g01708 1098 MobiDBLite consensus disorder prediction 207 239 - -
Bach3g01708 1098 MobiDBLite consensus disorder prediction 203 240 - -
Bach3g01708 1098 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 590 895 IPR028889 -
Bach3g01708 1098 Gene3D Cysteine proteinases 583 905 - -
Bach3g01708 1098 FunFam Ubiquitin carboxyl-terminal hydrolase 15 66 116 - -
Bach3g01708 1098 MobiDBLite consensus disorder prediction 970 1002 - -
Bach3g01708 1098 Coils Coil 39 59 - -
Bach3g01708 1098 MobiDBLite consensus disorder prediction 345 371 - -
Bach3g01708 1098 SUPERFAMILY Cysteine proteinases 586 897 IPR038765 -
Bach3g01708 1098 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 591 606 IPR018200 GO:0004843|GO:0006511
Bach3g01708 1098 ProSiteProfiles Zinc finger MYND-type profile. 75 112 IPR002893 -
Bach3g01708 1098 MobiDBLite consensus disorder prediction 347 371 - -
Bach3g01708 1098 Pfam Ubiquitin carboxyl-terminal hydrolase 590 892 IPR001394 GO:0004843|GO:0016579
Bach3g01708 1098 MobiDBLite consensus disorder prediction 1015 1098 - -
Bach3g01708 1098 MobiDBLite consensus disorder prediction 1015 1034 - -
Bach3g01708 1098 Pfam MYND finger 75 112 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01708 Bach-Chr3 25641864 25647428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01708 568 899 Miscellaneous Gene Families AT4G31670 51.351 1.56e-121 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01708 K11855 - gmx:100795674 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01708 3 25641864 25647428 Bach3g01708 3 25641864 25647428 ECH