Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01670 ATGGCATTCTCCAACGCCTTTATTTTGGGTCTGTTTCTAGCAATCAACATGGCCCTGCCCCTGCGAACCCTGGCAACAGATTACACCGTGGGAGAGACATCAGGTTGGGCAATGGGAGGTGATTACGGCAGTTGGACTAGTGGCAAGACCTTTGCAGTTGGTGATAGCCTCGTGTTCAACTATGGAGCTGGGCACACTGTGGATGAAGTTAAGGAGAGCGACTACAAATCCTGCACCACCGGCAATTCACTTACTTCAGACAGCAGTGGCGCCACCACCATTAAGTTGAAAACTGCAGGCACCCATTATTTCGTTTGTGCCGTTCCCGGCCATTGTTCCGGTGGCATGAAGCTTGCTGTTAATGTCAAGGCAGGAAAAGCCGCTGCTCCCGCCGCAACACCATCATCGTCCAAAGACTCACCTTCTGATGGTACCACGACCACAACTACACCCAGCACATCCACAACAACCACCACCACCACCACACCAACCACAAAATCAACTTCTTTGGCCACTAATCTCTCACCAAGCGTTGCTATCTTGATATTTTCTTGGATTTCCTACTGTGTTTTGCGTCTAGTATGA 585 0.5009 MAFSNAFILGLFLAINMALPLRTLATDYTVGETSGWAMGGDYGSWTSGKTFAVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSLTSDSSGATTIKLKTAGTHYFVCAVPGHCSGGMKLAVNVKAGKAAAPAATPSSSKDSPSDGTTTTTTPSTSTTTTTTTTPTTKSTSLATNLSPSVAILIFSWISYCVLRLV 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01670 194 Pfam Plastocyanin-like domain 36 116 IPR003245 GO:0009055
Bach3g01670 194 CDD Phytocyanin 26 122 - -
Bach3g01670 194 MobiDBLite consensus disorder prediction 129 170 - -
Bach3g01670 194 ProSitePatterns Type-1 copper (blue) proteins signature. 100 116 IPR028871 -
Bach3g01670 194 FunFam Blue copper 24 128 - -
Bach3g01670 194 SUPERFAMILY Cupredoxins 25 122 IPR008972 -
Bach3g01670 194 Gene3D - 24 129 IPR008972 -
Bach3g01670 194 ProSiteProfiles Phytocyanin domain profile. 26 124 IPR003245 GO:0009055
Bach3g01670 194 MobiDBLite consensus disorder prediction 133 170 - -
Bach3g01670 194 PANTHER BLUE COPPER PROTEIN 25 145 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01670 Bach-Chr3 25373311 25373978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01670 17 122 Miscellaneous Gene Families AT1G22480 60.377 2.89e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01670 - - gmx:100306522 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01670 3 25373311 25373978 Bach12g00730 12 5120244 5120823 BWGD
Bach3g01670 3 25373311 25373978 Bach3g01670 3 25373311 25373978 ECH