LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach3g01582	ATGGCTCAATCGTCTCCTCTCTCTGCTGAAATTGAGGCATTAAGTCATGTTCTGAGACTTGCGGAGGCATTCAGAGCTTTTGATGGAGACAACGATGGGCACATAAGCGCGGCGGAGCTGGGCGCACTCATGGGATCAATTGGGTACAATGCTAGCGAGCAGGAGGTGAGGGCAATGATGCGACAAGGGGACAAGAACAAGGACGGGTTGCTTAGCATAGATGAGTTCTTGGAGCTGAACACGAAGGATTTGCAGCCTGGCGATCTTGCCAATTTCCTGAGAACAGCATTTCAAGCTTTGGATGAAGATGGGAATGAGATTTTGATAGCGGAAGAACTACACGATGTCATGGCCAATTTGGGGCTTAATTTGTCTCTTGAGAATTGTAATAACATTGTCGCTTCTCTTGATATCAATGGAGATGGAGCTGTGGACATGGAGGACATTCGTCTCATTGTCAATTCTCTCCCCTAG	474	0.4747	MAQSSPLSAEIEALSHVLRLAEAFRAFDGDNDGHISAAELGALMGSIGYNASEQEVRAMMRQGDKNKDGLLSIDEFLELNTKDLQPGDLANFLRTAFQALDEDGNEILIAEELHDVMANLGLNLSLENCNNIVASLDINGDGAVDMEDIRLIVNSLP	157

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach3g01582	157	ProSitePatterns	EF-hand calcium-binding domain.	64	76	IPR018247	-
	Bach3g01582	157	Gene3D	-	2	82	-	-
	Bach3g01582	157	ProSiteProfiles	EF-hand calcium-binding domain profile.	51	86	IPR002048	GO:0005509
	Bach3g01582	157	ProSitePatterns	EF-hand calcium-binding domain.	137	149	IPR018247	-
	Bach3g01582	157	Pfam	EF-hand domain pair	111	148	IPR002048	GO:0005509
	Bach3g01582	157	ProSitePatterns	EF-hand calcium-binding domain.	28	40	IPR018247	-
	Bach3g01582	157	Gene3D	-	83	155	-	-
	Bach3g01582	157	ProSiteProfiles	EF-hand calcium-binding domain profile.	124	157	IPR002048	GO:0005509
	Bach3g01582	157	CDD	EFh	19	79	IPR002048	GO:0005509
	Bach3g01582	157	ProSiteProfiles	EF-hand calcium-binding domain profile.	88	123	IPR002048	GO:0005509
	Bach3g01582	157	ProSiteProfiles	EF-hand calcium-binding domain profile.	15	50	IPR002048	GO:0005509
	Bach3g01582	157	Pfam	EF-hand domain pair	20	78	IPR002048	GO:0005509
	Bach3g01582	157	PANTHER	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	19	78	-	-
	Bach3g01582	157	SMART	efh_1	128	156	IPR002048	GO:0005509
	Bach3g01582	157	SMART	efh_1	55	83	IPR002048	GO:0005509
	Bach3g01582	157	SMART	efh_1	92	120	IPR002048	GO:0005509
	Bach3g01582	157	SMART	efh_1	19	47	IPR002048	GO:0005509
	Bach3g01582	157	SUPERFAMILY	EF-hand	16	155	IPR011992	-
	Bach3g01582	157	FunFam	Calmodulin-2 A	10	155	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach3g01582	2	153	EF-hand Containing Proteins	AT1G24620	35.526	5.64e-31	108

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach3g01582	-		K02183	gmx:100782291	221.09

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach3g01582	3	24776989	24777462	Bach3g01582	3	24776989	24777462	ECH