Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01563 CACGTCGCTTTCCACCTCTTCCACCACTTCCACCACTGCCCCTCTTTTTTCTAATTTTATGCTCTAACACCTTCATATTCTCAACCTTCTCTGTCCTTGTTCTTGTTTTTGGTTTTCATTCTTTTCTTTTCTTCCTTTTCGGTTCTTCCGTTTAATATTTTTTCGATAAATCGGAAGATTCCCTGATTTTGACTTTAGTTTTAATTTCTGTTTGATCTAGTGTTTCAAGTTTTATAGCTTTTGTTTTCTCGTTAATCGTTTGATTTATTCATTTCCATCCCACTGTTGGGATTTCCTGTTTCGGAGATTTTTTTTGCTTTCGGATAGTTATGAAAGCTACTGTTGAACCATCAGTAGTTGAGAAATTTGATGATGGGGAAAAGGAGAAGAAGAAGAAAAGGCGCTCCAATCGTCGATCCAAGCAAGCCTCTGCATCCTCAGTAAACGAGGTACGCGTGGTGTCATCAGAGTGCTCCGGAAACAGCAAAACATCTACACACGTGACAGCATCCTCAAGTAATTCCTTATTGAAGCAGCTGGGGGTCAATGCCTTTCCCCCTGATGAAGAAGGATTGTCCACAGCATCAAAAGTTGCTTTCATTTCAATGCCACCAATTCATATCAATGAACAAGTAGATCCTGCCAATTTGCAAAATATACAAATGAACTGTGGAGGAATGGTTTCAAAATCATCTTCTGACCCAAATGCTGGTAGAGCTCCGTCAGGAACTTATTCAAACAAGGACTCATTTCCCTCTGGTCAGACTGGAGTTAGTGTTCAGAGAAGTTATTTTAGCTCACACTGGTCTATGGACGCCATTGAGAAGGCATTAGAGAAGGGTGACGTTTTTAAAGCTCTCTTTCGTGTCAATGCTCACAATAGACTTGAGGCTTATTGTAAAATTGATGGAGTGCCAACAGATGTTCTCATCAGTGGAATTTCTGCCCAGAATAGAGCTGTGGAAGGTGACATTGTTGCAATTAAGATTGATCCTTTGTCATTGTGGACAAAAATGAAAGGATCAAATGGGATTTGTAACATTACTGCATCAGTTGTAGATGATTCTAACCTACTGACTGAAGATAATAAAGTGTCGAGTAATATGTCTAAAGGAAAAGGTAAGGTAGACTCCAGTGATGAGTCTGCCCAGTACAGAAGTTGCCCTGATCAAAACAAAGTTGAAGCTGATAACTCCACAAGCCCTCGCAGAAGTAGCCCTTTTCCTGAAGAAAGATATTGCTGTGAGGAGAATGCTTCCAACTTAGATTCACTTGGACTGGTGAATCATGATGGTTTTGATGGATGGCACTGTGCTGCTTCTGATTCCTTAAATATCAGTTCTTCTAGTGGACAGAATGAAGTCATTAATGCAGTTGACAAGATGTGTTCCATTGTTAATTCTTACCCTTCCAAAAGACCAACTGGCAGGGTGGTTGCCATTCTTGAGAGGTCTCGACGTCGAGAGGCTGTTGTTGGTTATCTTAATGTTAAGCAGTGGGTTTCTTACAGGGACATGAACAGAACAGACGCCAAGAAAGCCAAAAATTTGGTTTCTGAGGATGAGTGTGTCCAGCTTACACCAACTGATCCAAAGTTTCCAAAACTAGTGCTTCCTGTCCGAGATTTGCCAGACTGCCTAAAGAAAAGGCTACAAAGTGGGGATGTGACAGTTGAAATGGATCTGGTAGCTGCACAAATTGATGATTGGGTTGAAGAAAGTCCGTTCCCTCAAGCTCATGTGTTGCATGTGTTTGGACGAGGTGGTGAAGTTCGGCCACAATTAGATGCAATCTTGTTTCAAAATGCTATCTGTTTGTCTGAATTTTCACCTGAAGCTTTGTCCTGCCTTCCTCATGTTCCTTGGGAGGTTCCGTTGAAGGAATTCAACACTAGAATGGATCTTAGAAATGTGTGCATATTCACTATTGATCCTTCAACTGCTACTGATCTGGACGACGCATTGTCAGTTGAGAAACTACCTAATGGAAACTTTAGAGTTGGTGTCCACATCGCTGATGTATCATACTTTGTTTTACCTGACACAGTGTTAGATCAAGAGGCTCAGTCTAGGTCAACAAGTGTCTATATGTTGCAAAAAAAGTTACCAACGTTGCCGCCCTTATTTTCTCAGGATATTGGTTCACTCAATCCCGGGGTAGATCGACTGGCAGTTACCATGTTCTTGGACATAAACCATGTTGGTGAAGTTGTAGACCGTTGGATTGGTCGTACTGTGATACACTCTTGTTGTAAGCTGTCATATGAGCATGCTCAGGACATTATCGATGGTGTTATTGATATTGAACATTCCAACGTCATTGGAGCTGACTATCCTAGGGTGCATGGCCGCTTTGAATGGGCTGATGTTGTTACATCTGTCAGGAGTCTTCATAAAATTTCAATAATTTTAAAAGATAAGAGGTTTAATGATGGGGCTCTACGGCTCGAAAGCTCCAAAGTGGTCTTTCTGTTTGATGAATATGGAATTCCATATGATAGCATACTCTCTGAGCGGAAAGAATCAAATTTTCTTGTTGAGGAATTTATGCTTTTGGCTAATAGAGCAGCTGCTGAAGTTATCTCTAGAGCCTATCCTGATGGTGCATTATTGCGAAGGCATCCTGAACCTAATATGAGGAAACTGAGAGAGTTTGAGGCGTTTTGTCTGAAACATGGTTTAGAACTGGACATATCTTCATCTGGCAGGATCCATCAGTCGTTAGAGCAGATAAGGGAAAAGCTTAAGGGTGACTCGACACTTTATGATATTCTTATTAACTATGCTACAAAGCCAATGCAGTTGGCATCTTACTTCTGTAGTGGAGATTTAAGGGACAATGAAAATGAATGGGGTCATTATGCATTGGCTGTCCCTTTTTACACTCATTTTACATCACCTCTGCGTCGATATCCGGATATTGTTGTTCATCGAACATTACTTGCTACTATAGAAGCTGAAGAATTGTATCTGAAGCATCAAAAGACATTGCTGGTTAACAAAAGAGAGAAAGTGCAAAAAAGGTGTTTCACAGGCATCGACTTTGATAGAAATGCTGCAGAATCTGTTGAGGGTAGGGAAGCCTTGTCAGCTGCAGCTTTGAAGCATAAGGTTCCGTGCAGTGAGTTACTCGTAGATGTTGCTGCTTATTGCAATGAGAGAAAGATGGCTAGTAGAAACGTTAAGGATGCCTGTGATAAACTTTACACGTGGGCTCTCCTGAAGAAGAAGGAGGTGTTACTGTCAGAAGCAAGAATATTGGGACTAGGCCCCAGATTCATGTCTATTTATATTCAGAAGCTAGCTATTGAGCGACGGATATATTATGATGAAGTTGAAGCCTTAACTGTGGAGTGGCTTGATGTGACGTCCACTTTGGTGCTTAGTATCTGTCCTAATAGACGTGGATTTAGGAGAGCTAGCTCTGGAAAATGGAGGGCATTTGATGAAGTTGTATGTCTCTCTTGTCCATATGACCTGAAAACTGCAATGGATGATTCTAAGGAGTATAACGAAGCAAAGATGGGAGATGGTATAACTGCCATGGACAGAGAGAACGGTTCCAAATCTGACAATTCAGTGGCTGATATTGAACCTGCAGTTTTCCCTCTCACAGTGCGTCTTCTTTCAACAATTCCAGTGGCACTTCATGCCGTTGGCGGCGACGAGGGACCCCTTGATACTGGGGCGAGGCTATACATGAGCTCATATTTCAAGTAATTCGGTAGTTTTGAAGTGCCAGATGCGATATCCAACCAAATGGGGTTTATGAGATGAAGCTGAGAGGACTTAATATGGGATAGACAAACTCCATTGTAGATTTAGTGTATAGTTCGACAGAGATAGGTGGGGACATTCTGTGGTCTACATTTGCTAATGTTATATCAACATGCTTATTCTGGATTTTGCGGTAAGGTGTAGATAAAGTGGGGGATTTC 3937 0.4145 MKATVEPSVVEKFDDGEKEKKKKRRSNRRSKQASASSVNEVRVVSSECSGNSKTSTHVTASSSNSLLKQLGVNAFPPDEEGLSTASKVAFISMPPIHINEQVDPANLQNIQMNCGGMVSKSSSDPNAGRAPSGTYSNKDSFPSGQTGVSVQRSYFSSHWSMDAIEKALEKGDVFKALFRVNAHNRLEAYCKIDGVPTDVLISGISAQNRAVEGDIVAIKIDPLSLWTKMKGSNGICNITASVVDDSNLLTEDNKVSSNMSKGKGKVDSSDESAQYRSCPDQNKVEADNSTSPRRSSPFPEERYCCEENASNLDSLGLVNHDGFDGWHCAASDSLNISSSSGQNEVINAVDKMCSIVNSYPSKRPTGRVVAILERSRRREAVVGYLNVKQWVSYRDMNRTDAKKAKNLVSEDECVQLTPTDPKFPKLVLPVRDLPDCLKKRLQSGDVTVEMDLVAAQIDDWVEESPFPQAHVLHVFGRGGEVRPQLDAILFQNAICLSEFSPEALSCLPHVPWEVPLKEFNTRMDLRNVCIFTIDPSTATDLDDALSVEKLPNGNFRVGVHIADVSYFVLPDTVLDQEAQSRSTSVYMLQKKLPTLPPLFSQDIGSLNPGVDRLAVTMFLDINHVGEVVDRWIGRTVIHSCCKLSYEHAQDIIDGVIDIEHSNVIGADYPRVHGRFEWADVVTSVRSLHKISIILKDKRFNDGALRLESSKVVFLFDEYGIPYDSILSERKESNFLVEEFMLLANRAAAEVISRAYPDGALLRRHPEPNMRKLREFEAFCLKHGLELDISSSGRIHQSLEQIREKLKGDSTLYDILINYATKPMQLASYFCSGDLRDNENEWGHYALAVPFYTHFTSPLRRYPDIVVHRTLLATIEAEELYLKHQKTLLVNKREKVQKRCFTGIDFDRNAAESVEGREALSAAALKHKVPCSELLVDVAAYCNERKMASRNVKDACDKLYTWALLKKKEVLLSEARILGLGPRFMSIYIQKLAIERRIYYDEVEALTVEWLDVTSTLVLSICPNRRGFRRASSGKWRAFDEVVCLSCPYDLKTAMDDSKEYNEAKMGDGITAMDRENGSKSDNSVADIEPAVFPLTVRLLSTIPVALHAVGGDEGPLDTGARLYMSSYFK 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01563 1129 Pfam RNB domain 522 874 IPR001900 GO:0003723|GO:0004540
Bach3g01563 1129 MobiDBLite consensus disorder prediction 31 63 - -
Bach3g01563 1129 Pfam Dis3-like cold-shock domain 2 (CSD2) 414 492 IPR041505 -
Bach3g01563 1129 SMART RNB_2 522 876 IPR001900 GO:0003723|GO:0004540
Bach3g01563 1129 MobiDBLite consensus disorder prediction 116 144 - -
Bach3g01563 1129 MobiDBLite consensus disorder prediction 271 296 - -
Bach3g01563 1129 Gene3D - 147 244 - -
Bach3g01563 1129 FunFam DIS3-like exonuclease 2 145 247 - -
Bach3g01563 1129 SUPERFAMILY Nucleic acid-binding proteins 484 966 IPR012340 -
Bach3g01563 1129 Hamap DIS3-like exonuclease 2 [DIS3L2]. 18 1104 IPR028591 GO:0000175|GO:0034427
Bach3g01563 1129 MobiDBLite consensus disorder prediction 1 63 - -
Bach3g01563 1129 MobiDBLite consensus disorder prediction 7 21 - -
Bach3g01563 1129 SUPERFAMILY Nucleic acid-binding proteins 365 494 IPR012340 -
Bach3g01563 1129 PANTHER RIBONUCLEASE 22 1126 - -
Bach3g01563 1129 ProSitePatterns Ribonuclease II family signature. 843 867 IPR022966 -
Bach3g01563 1129 SUPERFAMILY Nucleic acid-binding proteins 153 374 IPR012340 -
Bach3g01563 1129 MobiDBLite consensus disorder prediction 253 300 - -
Bach3g01563 1129 Gene3D - 397 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01563 Bach-Chr3 24649305 24655711 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01563 K18758 - gmx:100817387 1546.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01563 3 24649305 24655711 Bach3g01563 3 24649305 24655711 ECH