Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00961 CTTCACTCCATGCTCTCCCAGAGGAGTTGGAGGATAAATAAATCAAATCTAGGTTCTTCAGAAGGGGCACTCGACCTTCTCCCTAGCCCCTTTTTGTCTCCTTAGCAATTTTTTTTTTTTTTTTTTTTTTTTTTTCAATTAAACTTCTGAGTTGTAGCTATAAGAAGGAGAGGATAGCGAATTAGGAACTGTACCCAGTTTTGAGGCAACAGATTTTCTTCTGTTTCTATCAGCAATTCTCAGCTACTTAGCTTCAAAATTTTTGATTTAGCTAAAAGAGAAGATGGGTATTAGTAATCAGGAGGCAATCAAGCAATTCCAGTCCATGATTGAGGACGTGGATGAGCAACTGAAGAACTCATTCCAGAATATGCACCAGGGCCACCTTGCTGAGACATTAGAACGGTTTCTCAAAGCAAGGGACTGGAATGTTTCCAAAGCCCACAAAATGTTGGTTGATTGTTTAAATTGGAGAGTACAAAATGAGATTGACAATGTTTTAGCGAAGCCAATCCCCACTGATTTGTATAGAGCTGTACGAGATTCTCAACTCATAGGCATGTCGGGCTACTCAAAGGAGGGCCTACCTGTCATTGCTGTTGGTGTTGGGCTCAGCACATACGACAAAGCATCTGACAAATACTATGTGCAGTCACACATCCAAATGAATGAATATAGAGATCGTGTGGTATTGCCATTAGCTACAAAGAAACATGGACGGTATATTGGCACCTGTGTGAAAGTGTTGGATATGACTGGCTTAAGACTATCAGCACTAAACCAATTGAGGCTTTTGACTGCGATATCTACTGTAGATGACCTGAACTACCCAGAAAAGACGGACACGTATTATATTGTAAATGTGCCATATGTATTCTCAGCCTGTTGGAAGGTTGTAAAACCTCTTTTGCAAGAGAGAACAAGGAGGAAAATCCAGGTCCTGCAAGGTTGTGGGAGGGAGGAACTAGTTAAGATTATGGACTATTCATCCCTCCCACACTTTTGTAGAAAAGGGGATTCCAAGTCATCCAGACATAATGCTGCGGTAAATACTGAAAATTGTTTCTCCTTTGACCATGCCTTCCATAAAAAACTCTACAATTTCATCAAGCAGCAAGCTCTGGTTCAGGAATCTACATCACCAATCAAACAAGGTTCTTTCTTTGTGGACTTGCCAGAGCCAGAACCAGATGATGCCAAAATTGCCAAGACAATTGAAAATGAGTTCCACAGATTGGAGAAGCAGAATGGACTTGCCAATTCACTGAATGGTCTTGTGGTTAACGGTAATTGA 1294 0.4088 MGISNQEAIKQFQSMIEDVDEQLKNSFQNMHQGHLAETLERFLKARDWNVSKAHKMLVDCLNWRVQNEIDNVLAKPIPTDLYRAVRDSQLIGMSGYSKEGLPVIAVGVGLSTYDKASDKYYVQSHIQMNEYRDRVVLPLATKKHGRYIGTCVKVLDMTGLRLSALNQLRLLTAISTVDDLNYPEKTDTYYIVNVPYVFSACWKVVKPLLQERTRRKIQVLQGCGREELVKIMDYSSLPHFCRKGDSKSSRHNAAVNTENCFSFDHAFHKKLYNFIKQQALVQESTSPIKQGSFFVDLPEPEPDDAKIAKTIENEFHRLEKQNGLANSLNGLVVNGN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00961 336 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Bach3g00961 336 SUPERFAMILY CRAL/TRIO N-terminal domain 7 75 IPR036273 -
Bach3g00961 336 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 1 328 - -
Bach3g00961 336 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Bach3g00961 336 SUPERFAMILY CRAL/TRIO domain 80 241 IPR036865 -
Bach3g00961 336 CDD SEC14 82 240 IPR001251 -
Bach3g00961 336 Gene3D - 3 284 IPR036865 -
Bach3g00961 336 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Bach3g00961 336 SMART sec14_4 78 246 IPR001251 -
Bach3g00961 336 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 238 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00961 Bach-Chr3 20139228 20143684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00961 1 329 Acyl Lipid Metabolism Gene Families AT5G47730 66.061 8.56e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00961 K26544 - gmx:100817955 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01353 12 9508986 9513556 Bach3g00961 3 20139228 20143684 BWGD
Bach3g00961 3 20139228 20143684 Bach3g00961 3 20139228 20143684 ECH