Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00900 ATGTCAAAATTTGAGGGTGTTGTTGTCTCTGATCAATGGCTTCAAAGTCAGTTTACACAAGTTGAACTTCGCAGCCTGAAATCGAGATTTAATTCAATAAAAAATCAGAATGGTAAAGTTACCGTTGGAGATTTGCCAGCTTTGATGGTGAAGCTTAAGGCGTTTAGAGAAATGTACAATGAGGAGGAGATTAGAGGGATCTTTGGTGAGCCAGACACCAATATGAACAATGAGGTTGATTTTGAAAGCTTCCTAAGGACCTATTTGAATTTGCAAAACCGAGCGACAGCAAAACAAGGAGGTACAAAGAACTCGTCATCATTCCTTAAGGCAACCACAACCACTCTTCTTCACACAATCAGTGAATCAGAAAAGTCGTCTTATGTTGCTCACATAAACGCCTACCTTGGTGATGACCCATTTCTGAAGCAATATCTTCCCTTGGACCCTGCTACAAATGATCTATTTGATATTGTCAAAGATGGAGTTCTTCTGTGTAAGCTTATCAATGTTGCTGTGCCTGGGACTATAGATGAGCGAGCCATCAATGCAAAGCGGATTCTAACTCTGTGGGAGAGGAATGAGAACCATACTCTCTGCCTCAATTCTGCCAAGGCAATTGGATGCACAGTGGTTAACATTGGTACACAGGACTTAGTTGAAGGAAGACCTCATCTTGTTTTAGGGTTGATTTCCCAAATGATAAAGATCCAATTATTGGCAGACCTAAACCTTAAGAAGACACCTCAGCTTGTGGAATTAGTAGATGACAGCCAGGAGGTTGAAGAACTTCTTAGTTTGCCCCCTGAGAAGGTCCTACTAAAGTGGATGAATTTTCATCTTGAGAAAGGTGGCTACAAGAAACCTGTTAAGAATTTTTCTTCTGATCTGAAGGATGCGGAAGCCTATGCTTATCTGCTTAATGTCCTTGCACCTGAACACTGCAATCCATCCACCTTGGGTACTAAGGATCCCTATGAAAGGGCAAAACTAGTACTCGATCATGCAGAGAGAATGGGCTGCAAAAGATACTTGGCAACCAAGGACATTGTCGAGGGTTCCTCAAATCTGAATCTTGCATTTGTGGCGCAAATATTTCATCACAGGAGTGGCTTATCTACAGACAATAAAAAGATGTCCTATGGTGAGATGATGACAGATGATGTACAAACATCTAGAGAAGAGAGATGCTTCCGACTTTGGATTAATAGTCTGGGAATTGCTACATATGTAAATAATGTATTTGAGGATGTCAGAAATGGATGGATACTTCTGGAAGTGCTAGACAAGGTTTCTCCGGGATCAGTTCAGTGGAAACAGGCCACAAAACCTCCAATTAAGATGCCATTCAGAAAAGTAGAGAACTGCAATCAAGTGGTTAAAATTGGGAAACAACTTAGATTCTCACTAGTCAATGTAGCTGGCAATGACATTGTGCAAGGAAATAAGAAACTCATTCTTGCTTTCTTATGGCAGTTGATGAGACACACAATGCTTCAACTGTTGAAAAATTTGAGATCCCATTCCCAAGGAAAGGAGATCACCGATGCTGATATCCTGAAATGGGCAAACAGAAAAGTGAAGAGCATCGGCAAGGCTTCTCACATTGGTAGTTTTAAGGATAAAAGCTTGTCAAATGGAATTTTTTTCCTTGAGCTTCTGAGTGCTGTAGAGCCAAGAGTTGTCAATTGGAACCTTGTCACCAAGGGTGAAAGTGATGATGAGAAGAAATTAAATGCTACCTATATAATCAGTATCGCACGGAAGCTTGGTTGTTCCATCTTTTTGTTACCTGAGGATATTATGGAGGTTAATCAGAAGATGATTCTCACTCTTGCGGCGAGTATCATGTATTGGAGCCTGCAGCAGCAGACTGAAGATGCAGATTCATTTCCTTCACCTGCCGGTACTGCTAGTACTATTACTACTACCACTACACCAGATGCATCCCCAGCACCATCAATCAGTGAAGATGAAATTTCTTCCCTTGGAGGTGAATTCTCCAACTTAAGTATTGATGATTGCACGTCCGACACAACAGTCTCCTCACAGTTTGAGTACGAGTGTGTTCTTGTTGGAGATGAGCCATAG 2091 0.4132 MSKFEGVVVSDQWLQSQFTQVELRSLKSRFNSIKNQNGKVTVGDLPALMVKLKAFREMYNEEEIRGIFGEPDTNMNNEVDFESFLRTYLNLQNRATAKQGGTKNSSSFLKATTTTLLHTISESEKSSYVAHINAYLGDDPFLKQYLPLDPATNDLFDIVKDGVLLCKLINVAVPGTIDERAINAKRILTLWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLVLGLISQMIKIQLLADLNLKKTPQLVELVDDSQEVEELLSLPPEKVLLKWMNFHLEKGGYKKPVKNFSSDLKDAEAYAYLLNVLAPEHCNPSTLGTKDPYERAKLVLDHAERMGCKRYLATKDIVEGSSNLNLAFVAQIFHHRSGLSTDNKKMSYGEMMTDDVQTSREERCFRLWINSLGIATYVNNVFEDVRNGWILLEVLDKVSPGSVQWKQATKPPIKMPFRKVENCNQVVKIGKQLRFSLVNVAGNDIVQGNKKLILAFLWQLMRHTMLQLLKNLRSHSQGKEITDADILKWANRKVKSIGKASHIGSFKDKSLSNGIFFLELLSAVEPRVVNWNLVTKGESDDEKKLNATYIISIARKLGCSIFLLPEDIMEVNQKMILTLAASIMYWSLQQQTEDADSFPSPAGTASTITTTTTPDASPAPSISEDEISSLGGEFSNLSIDDCTSDTTVSSQFEYECVLVGDEP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00900 696 ProSiteProfiles Calponin homology (CH) domain profile. 513 621 IPR001715 GO:0005515
Bach3g00900 696 FunFam Fimbrin-2 isoform A 245 373 - -
Bach3g00900 696 Gene3D - 388 505 IPR036872 -
Bach3g00900 696 ProSiteProfiles Calponin homology (CH) domain profile. 122 239 IPR001715 GO:0005515
Bach3g00900 696 PANTHER FIMBRIN/PLASTIN 1 624 IPR039959 GO:0051015|GO:0051017
Bach3g00900 696 CDD CH_AtFIM_like_rpt2 259 367 - -
Bach3g00900 696 SMART ch_5 124 237 IPR001715 GO:0005515
Bach3g00900 696 SMART ch_5 515 619 IPR001715 GO:0005515
Bach3g00900 696 SMART ch_5 269 368 IPR001715 GO:0005515
Bach3g00900 696 SMART ch_5 394 496 IPR001715 GO:0005515
Bach3g00900 696 Gene3D - 120 244 IPR036872 -
Bach3g00900 696 MobiDBLite consensus disorder prediction 629 661 - -
Bach3g00900 696 ProSiteProfiles Calponin homology (CH) domain profile. 267 370 IPR001715 GO:0005515
Bach3g00900 696 FunFam Fimbrin-2 like 388 505 - -
Bach3g00900 696 CDD CH_AtFIM_like_rpt4 513 621 - -
Bach3g00900 696 CDD CH_AtFIM_like_rpt1 123 238 - -
Bach3g00900 696 CDD CH_AtFIM_like_rpt3 390 503 - -
Bach3g00900 696 Gene3D - 245 373 IPR036872 -
Bach3g00900 696 SUPERFAMILY EF-hand 13 95 IPR011992 -
Bach3g00900 696 Gene3D - 506 618 IPR036872 -
Bach3g00900 696 FunFam Fimbrin-1 isoform A 506 618 - -
Bach3g00900 696 Pfam Calponin homology (CH) domain 394 497 IPR001715 GO:0005515
Bach3g00900 696 Pfam Calponin homology (CH) domain 145 236 IPR001715 GO:0005515
Bach3g00900 696 Pfam Calponin homology (CH) domain 516 617 IPR001715 GO:0005515
Bach3g00900 696 Pfam Calponin homology (CH) domain 268 369 IPR001715 GO:0005515
Bach3g00900 696 Gene3D - 1 119 - -
Bach3g00900 696 ProSiteProfiles Calponin homology (CH) domain profile. 392 498 IPR001715 GO:0005515
Bach3g00900 696 ProSitePatterns Actinin-type actin-binding domain signature 2. 211 235 IPR001589 -
Bach3g00900 696 SUPERFAMILY Calponin-homology domain, CH-domain 120 618 IPR036872 -
Bach3g00900 696 FunFam Fimbrin-2 like 118 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00900 Bach-Chr3 19680519 19685637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00900 1 683 EF-hand Containing Proteins AT5G55400 72.046 0.0 1015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00900 K17275 - gmx:100794850 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g00900 3 19680519 19685637 Bach3g00900 3 19680519 19685637 ECH