Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00886 ATGGAAATTGATGCGCTCCCGATTAGTTTGTGCTCCAAAGAGATCCAGAAGATCTACCAGGAGTGGTTCAGTCTAGCTGATTCAGATGGTGATGGCCGCATTACAGGAAGCGATGCCACGAAGTTTTTTGCCATGTCCAATTTGTCCCGTCAAGATCTTAAGCAGGTGTGGGCTATTGCAGATTCAAAGCGACAAGGATATCTTGGGTTCAAAGAGTTTATCATTGCTATGCAGCTAGTCTCTTTGGCACAAGGTGGGCACTCAATAACACAAGATCTGCTGACTAGTAATCGTAGGTTATTTTTGTTGAGCTCTATCAATCTCATCAAGTTATCTTATGAAAGCCTAACTTCTGTTTCAGTTGATGTGGAAAATCTGCAACCTCCAGCAATGGAGGGGTTGGATGAAAAACTAGCTAAGAAAAAGCATAAACACAAAGGCCTTGATGCAAATGGTAGTTCTAAATTGCAGCCATCAATTTCAAATAGCTGGTTTTCTTCGAAGTCGACGAAAAATGTGCCTTTGTCGTCTGTGACATCAATAATTGATGGTTTGAAGAAGTTATACAGTCAGAAGTTGAAGCCACTAGAAGCTACTTACCGTTTTAATGATTTTGTATCTCCATTATTGACAAGTAGTGATTTTGATGCCAAACCAATGGTTATGCTTTTGGGTCAATACTCCACTGGAAAAACTACATTTATTAAACATTTGCTTAAAACTAGTTATCCAGGAGCTCACATTGGACCTGAGCCAACAACAGACAGATTTGTTGTTGTCATGTCTGGACCTGATGAGAGAAGTATACCGGGTAATACTGTTGCTGTTCAAGCAGACATGCCCTTCAGTGGTCTCACAACTTTTGGCACAGCTTTTCTGTCAAAATTTGAGTGTTCTCAATTGCCTCATCACCTACTGGAGCATATTACATTTGTGGATACTCCTGGTGTTTTGTCTGGTGAAAAGCAACGGACACAACGGGCATATGATTTTACTGGTGTAACATCTTGGTTTGCTGCTAAATGTGACCTGATACTCCTTCTATTTGATCCTCACAAACTTGATGTCAGCGATGAGTTCAGGCGTGTGATATCATCCCTGCGCGGGCATGATGACAAGATTCGAGTGGTTTTAAATAAGGCTGACCAAGTTGATACTCAACAATTGATGAGGGTTTATGGAGCATTAATGTGGTCACTTGGGAAGGTGCTCAATACTCCTGAGGTCATGCGTGTGTACATTGGTTCTTTCAACGATAAACCTATAAATGATGCTATTACTGGTCCTATTGGCAAGGAACTCTTTGAAAAAGAACAGGATGACCTTCTTTCAGATCTGAAAGACATACCAAAGAAGGCTTGTGATCGAAGAATCAATGAATTTGTGAAACGTGCACGGGCTGTCAAGATACATGCTTATATCATCAGTCATCTTAAAAAAGAGATGCCTGCTATGATTGGCAAAGCTAAAACTCAGCAAAGGCTCGTTGATAACTTGGAAGATGAATTTGGAAAGATACAAAGGGAGTTCCATCTACCTCCTGGGGACTTTCCAAATGTTGAACATTTCAAGGAGATTTTGAATGGCTACAGCATCGACAAGTTTGAGAAATTGAAACCAAAAATGATACAAGCTGTTGATGACATGTTAGAGTCAGAGGTAGCTTCACCGGTGGTGGCGCGTCAAAATTTTGGTTCCAAAACGGTTTTATTGTGA 1716 0.4073 MEIDALPISLCSKEIQKIYQEWFSLADSDGDGRITGSDATKFFAMSNLSRQDLKQVWAIADSKRQGYLGFKEFIIAMQLVSLAQGGHSITQDLLTSNRRLFLLSSINLIKLSYESLTSVSVDVENLQPPAMEGLDEKLAKKKHKHKGLDANGSSKLQPSISNSWFSSKSTKNVPLSSVTSIIDGLKKLYSQKLKPLEATYRFNDFVSPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAVQADMPFSGLTTFGTAFLSKFECSQLPHHLLEHITFVDTPGVLSGEKQRTQRAYDFTGVTSWFAAKCDLILLLFDPHKLDVSDEFRRVISSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPINDAITGPIGKELFEKEQDDLLSDLKDIPKKACDRRINEFVKRARAVKIHAYIISHLKKEMPAMIGKAKTQQRLVDNLEDEFGKIQREFHLPPGDFPNVEHFKEILNGYSIDKFEKLKPKMIQAVDDMLESEVASPVVARQNFGSKTVLL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00886 571 FunFam EH domain-containing protein 1 221 449 - -
Bach3g00886 571 CDD EHD 220 464 - -
Bach3g00886 571 Gene3D - 11 101 - -
Bach3g00886 571 PANTHER EH DOMAIN 18 557 - -
Bach3g00886 571 SMART efh_1 52 80 IPR002048 GO:0005509
Bach3g00886 571 SMART efh_1 18 46 IPR002048 GO:0005509
Bach3g00886 571 Pfam Dynamin family 221 380 IPR045063 -
Bach3g00886 571 Pfam Domain of unknown function (DUF5600) 456 555 IPR040990 -
Bach3g00886 571 ProSiteProfiles EH domain profile. 19 93 IPR000261 GO:0005515
Bach3g00886 571 Gene3D - 185 555 - -
Bach3g00886 571 Pfam Cytoskeletal-regulatory complex EF hand 12 80 IPR000261 GO:0005515
Bach3g00886 571 Coils Coil 489 509 - -
Bach3g00886 571 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 215 451 IPR030381 GO:0005525
Bach3g00886 571 CDD EH 19 84 IPR000261 GO:0005515
Bach3g00886 571 ProSiteProfiles EF-hand calcium-binding domain profile. 48 83 IPR002048 GO:0005509
Bach3g00886 571 Pfam N-terminal EH-domain containing protein 184 216 IPR031692 -
Bach3g00886 571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 489 IPR027417 -
Bach3g00886 571 SUPERFAMILY EF-hand 12 98 IPR011992 -
Bach3g00886 571 SMART eh_3 8 99 IPR000261 GO:0005515
Bach3g00886 571 Gene3D - 221 449 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00886 Bach-Chr3 19579753 19587350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00886 1 554 EF-hand Containing Proteins AT3G20290 78.417 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00886 K12483 - cave:132175362 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g00886 3 19579753 19587350 Bach3g00886 3 19579753 19587350 ECH