Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00879 ATGGATTCCCGCGCATTCTCCGTCTTGTTCATCTTGCTTCTTCTATCACTCTCTGCTTCTTTAGAAGCTGCGGGTTTATTGGGAATAAACTACGGCAGGGTGGCGAACGACCTCCCAACGCCGTCGGAGGTGGTGGAGCTTCTCAAAGCGCAAGGGCTCAACCGGGTCAAGCTCTATGACACTGACGCAACTGTGCTCACGGCGCTTGCCTACTCTGATATAAACGTCGTCGTTGCTATGCCCAATGAGCTTCTCTCCTCCTACGCCGCTGACCAATCGTCCACTGACGCCTGGGTACAAGCCAACATCTCCCCTTACTATCCCGCCACCAAAATCGAAGCCATTGCCGTAGGCAATGAAGTCTTTGTCGACCCGGAAGACAGGACCAAGTTCCTCGTTCCAGCGATGAAGAACGTTCATGCGTCGCTTGTGAAGTACAAACTCGATTCCGACATTAAAATCTCGTCACCGATTGCCTACACTGCATTACAAACTTCGTACCCAGCTTCATCTGGAGCATTTAATTCCAGCTTAACCGAACCCGTCATCAAACCCATGTTGGATTTTCTCCGCCAAACGTCGTCGTATCTTATGGTGAACGTATACCCGTTTCTCGCATACGCCGCAAAAGATGCTAAGATCTCATTGGACTATGCACTATCCAACCAGAACCCGGGTGTGGTGGATTCGGGTAACGGGTTGAAATACGACAGCTTGTTTGAGGCTCAAATCGATGCTGTTTTTGCGGCCTTGTCGGCCCTCAAATACGACGACGTCAAGGCGGTGGTTACGGAGACGGGGTGGCCCTCTAAAGGGGACGAGGATGAAACTGGCGCAAGCGAACAGAATGCGGCGTCGTATAATGGTAACCTTGTCAAGCGCGTTCTAACGGGTAATGGGACCCCCTTGAGGCCGAACGACCCACTCAACGTTTTTCTTTTCGCTTTGTTCAATGAGAACCAAAAACCGGGGCGGACATCGGAGAGGAACTTTGGACTCTTCTATCCCAATAAGCAAAAGGTTTATGATATCCCGTTGACTCTAGCTCAGCTTGGACAGACATGA 1065 0.5089 MDSRAFSVLFILLLLSLSASLEAAGLLGINYGRVANDLPTPSEVVELLKAQGLNRVKLYDTDATVLTALAYSDINVVVAMPNELLSSYAADQSSTDAWVQANISPYYPATKIEAIAVGNEVFVDPEDRTKFLVPAMKNVHASLVKYKLDSDIKISSPIAYTALQTSYPASSGAFNSSLTEPVIKPMLDFLRQTSSYLMVNVYPFLAYAAKDAKISLDYALSNQNPGVVDSGNGLKYDSLFEAQIDAVFAALSALKYDDVKAVVTETGWPSKGDEDETGASEQNAASYNGNLVKRVLTGNGTPLRPNDPLNVFLFALFNENQKPGRTSERNFGLFYPNKQKVYDIPLTLAQLGQT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00879 354 FunFam Glucan endo-1,3-beta-glucosidase 3 26 349 - -
Bach3g00879 354 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 345 IPR044965 GO:0004553|GO:0005975
Bach3g00879 354 Pfam Glycosyl hydrolases family 17 27 344 IPR000490 GO:0004553|GO:0005975
Bach3g00879 354 Gene3D Glycosidases 26 351 - -
Bach3g00879 354 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Bach3g00879 354 ProSitePatterns Glycosyl hydrolases family 17 signature. 259 272 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00879 Bach-Chr3 19531520 19532686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00879 24 346 Glycoside Hydrolase AT5G55180 71.207 2.83e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00879 - - csav:115725171 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g00879 3 19531520 19532686 Bach3g00879 3 19531520 19532686 ECH