LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach2g02361	ATGAAAAACCGTTATCTACTTCTTCTCCTTCTGATTTTGCAGCTGAGCTCCATCCTCTCTTGGAAAAAGGATGAGTTCAGAAACTGTCACCAGACACCATTTTGCAAACGAGCTCGAGCTCGCAAGCCTGGTTTCTGCTCTCTTGTCGCCCATGATGTCTCCATATCCGATGGTGACCTCACTGCCAAGCTCATTTCCAAAAACAAAGACAATCAGGAAGATCAAAGTCAAATCAGACCATTGATTCTCACTCTTTCTGTTTACCAAGATGGAATCATGCGGCTCAAGATTGATGAAGACCCTTCTCTAGATCCGCCCAAGAAGCGCTTCGAGGTCCCTGACGTGATTGTGTCGGAATTTGTGGACAAGAAGCTTTGGCTTCAAAGGCTTTCAACGGAGACCATCGGCGGAGATTCTGGTCCCTCTTCAATTGTATATTTATCTGAAAGTTACGAAGCAGTCCTTCGTCACGATCCATTTGAGGTTTATGTACGTGATAGTGCTGGTAATCGTGTAGTGTCTTTGAATTCTCACGGATTGTTTGATTTTGAGCAATTAAGACAGAAAGAAGAAGGGGATGACTGGGAAGAGACATTCAGAGGGCATACAGATAAAAGGCCCTATGGCCCTCAATCGATTAGTTTCGATGTTTCATTCTACGAGGCTGATTTTGTGTATGGAATTCCTGAGCATGCTACGAGTCTTGCTTTGAAACCCACAAGAGGACCCGGGGTAGAGGAATCAGAGCCGTATCGGTTGTTTAATTTGGATGTTTTCGAGTATATTCATGATTCACCATTTGGACTTTATGGGTCAATACCTTTCATGCTTTCTCATGGGAAATCCCGGGGGACTTTGGGTTTTTTCTGGTTGAATGCAGCTGAAATGCAGATTGACGTTCTTGGCTCTGGGTGGGATGCAGAGTCTGGAATTTCACTTCCCTCCTCTCAAAGCAGGATTGATACCTTTTGGATGAGTGAAGCTGGTGTCGTCGATGCATTCTTTTTCTTGGGTCCTGGGCCCAAGGATGTGATACGGCAGTATACTAGTGTAACTGGTACTACAGTAATGCCACAGCTCTTCTCAATTGGATATCATCAATGTAGGTGGAACTATCGGGATGAAGAGGATGTTGAGAATGTAGATTCTGAGTTTGATGAGCACGATATTCCATATGATGTATTGTGGCTTGATATTGAGCACACTGATGGGAAGAAGTATTTTACATGGGATAGGGTCCTATTCCCACATCCTGAAGAGATGCAGAGAAAGTTGTCTGGGAAGGGTAGACACATGGTTACCATTGTGGATCCTCATATTAAGCGGGATGAGTCATTTCAATTGCACAAGGAGGCCACAGAGAAGGGGTATTATGTTAAGGATGCTAATGGCAATGACTATGGTGGTTGGTGCTGGCCTGGTTCATCATCATACCCAGACATGTTAAAATCAGAAGTTAGGTCATGGTGGGCTGATAAGTTTTCTTACCAAAATTATTTTGGTTCAACTCCTTCACTTTACATATGGAATGATATGAACGAACCTTCAGTCTTCAATGGACCAGAGGTTACGATGCCTAGAGATGCTTTACATTATGGAGGTGTGGAAAATCGGGAGCTGCATAATGCCTATGGATACTACTTCCACATGGCAACAACTGACGGGCTAGTAAAACGTGGTGATGGGAAAGATAGGCCGTTTGTTTTGTCTAGAGCCTTATTTGCTGGAACTCAAAGGTGTGGAGCAGTTTGGACTGGGGATAATTCTGCTGATTGGGATCACCTAAGAGTTTCTGTTCCAATGGTTTTGACCCTTGGTCTTACTGGAGTGTCATTCTCTGGTGCCGATGTTGGTGGCTTTTTTGGGAATCCTGAACCGGAGTTATTGGTTCGCTGGTATCAGATAGGAGCTTACTATCCTTTCTTCAGGGGCCATGCCCACCATGACACTAAAAGACGAGAACCATGGTTGTTCGGAGAAAGAAATACAGAACTTATCAGGGAGGCAATACATGTTCGTTATGCACTGCTTCCATATTTCTACACATTATTTAGGGAGGCCAACACCACCGGTGTTCCTGTAGTACGTCCATTGTGGATGGAGTTCCCATCTGATGAAGCTACTTTTGGCAATGATGAAGCTTTCATGGTTGGAAACAGCCTCTTAGTGCAAGGGATCTATAATGAGCATGTTAAACATGCAGCTGTCTATCTGCCTGGAAAACAATCCTGGTATGGTTTAAGGACTGGAACTGTATACAAGGGAGGGGTGACTCACAAGTTGGATGTTACTGAGAGCGTTCCTGCTTTCCAAAAAGCTGGGACCATTGTAACAAGGAAGGACCGGTTTCGACGGAGTTCCACACAGATGGTGAATGATCCCTTTACTCTGGTTATTGCTCTGAATAGTTCCCAGGCTGCTGAAGGTGAATTGTATATTGATGATGGTAAGAGCTTCAATTTTCGACAAGGGGCCTATATCCATCGTCGTTTTATTTTCTCAGATGGAAGGCTTACATCTTTAGATCTGCGACCTGCTTCCGCTGGCAATATTCGGTTTTCTTCAGATGAAGTTATTGAAAGGATTATCCTGCTAGGACATGCTTCGGGGTCAAAGAATGCACTGATTGAGCCATCAAATGATAAAGTTGATATTGTACTCGGCCCGCTTTGGGTTCAAAGGACACGTGGGCCAACTGTTCTGACCATCCGCAGGCCTAATGTTCGTGTGGCAGATGATTGGAGTATAAAGATTTTGTAAATTTATTGAAGTTCTTGTTTGAGGAGGAAATTCAGTCTTCAATGTCATTGATGGTGCACAATGAGATTTCTCTCTGTAATTTTGATTCTAAAGTCTAGCAGAACATGAGCGGATCGCTTGCTATGAAGATGGCATGGACACGTTTTGACCAGCTTGATTCACGTTTAGAATTTTTTGGATCTTGAGAGATGATACTTGCAAGTTGTGACTCCATCTCTGCAGGAACTTCTGTAGAGATATTTTATTATCTTCTATAAGGGCGAACTCATCTCAACCTGTACTGACTAATTAGGATATGCGTGTTGGCTGTCACCTCACTAGTTTTTTCTTTTTTTCAAAAAATGTAGTATTGATATCACATTAAGCATTATTTAATTTAAATTTGAGTCGTATGTGACCTTAAG	3164	0.4308	MKNRYLLLLLLILQLSSILSWKKDEFRNCHQTPFCKRARARKPGFCSLVAHDVSISDGDLTAKLISKNKDNQEDQSQIRPLILTLSVYQDGIMRLKIDEDPSLDPPKKRFEVPDVIVSEFVDKKLWLQRLSTETIGGDSGPSSIVYLSESYEAVLRHDPFEVYVRDSAGNRVVSLNSHGLFDFEQLRQKEEGDDWEETFRGHTDKRPYGPQSISFDVSFYEADFVYGIPEHATSLALKPTRGPGVEESEPYRLFNLDVFEYIHDSPFGLYGSIPFMLSHGKSRGTLGFFWLNAAEMQIDVLGSGWDAESGISLPSSQSRIDTFWMSEAGVVDAFFFLGPGPKDVIRQYTSVTGTTVMPQLFSIGYHQCRWNYRDEEDVENVDSEFDEHDIPYDVLWLDIEHTDGKKYFTWDRVLFPHPEEMQRKLSGKGRHMVTIVDPHIKRDESFQLHKEATEKGYYVKDANGNDYGGWCWPGSSSYPDMLKSEVRSWWADKFSYQNYFGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHYGGVENRELHNAYGYYFHMATTDGLVKRGDGKDRPFVLSRALFAGTQRCGAVWTGDNSADWDHLRVSVPMVLTLGLTGVSFSGADVGGFFGNPEPELLVRWYQIGAYYPFFRGHAHHDTKRREPWLFGERNTELIREAIHVRYALLPYFYTLFREANTTGVPVVRPLWMEFPSDEATFGNDEAFMVGNSLLVQGIYNEHVKHAAVYLPGKQSWYGLRTGTVYKGGVTHKLDVTESVPAFQKAGTIVTRKDRFRRSSTQMVNDPFTLVIALNSSQAAEGELYIDDGKSFNFRQGAYIHRRFIFSDGRLTSLDLRPASAGNIRFSSDEVIERIILLGHASGSKNALIEPSNDKVDIVLGPLWVQRTRGPTVLTIRRPNVRVADDWSIKIL	919

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach2g02361	919	CDD	GH31_N	208	353	-	-
	Bach2g02361	919	Gene3D	Glycosidases	355	528	-	-
	Bach2g02361	919	Gene3D	Glycosidases	529	701	-	-
	Bach2g02361	919	ProSitePatterns	Glycosyl hydrolases family 31 active site.	507	514	IPR030458	-
	Bach2g02361	919	FunFam	Glucosidase, alpha neutral C	355	526	-	-
	Bach2g02361	919	Pfam	Glycosyl hydrolases family 31	334	777	IPR000322	GO:0004553\|GO:0005975
	Bach2g02361	919	SUPERFAMILY	Galactose mutarotase-like	33	341	IPR011013	GO:0003824\|GO:0005975\|GO:0030246
	Bach2g02361	919	PANTHER	ALPHA-GLUCOSIDASE	17	880	-	-
	Bach2g02361	919	FunFam	Glucosidase alpha, neutral C	527	701	-	-
	Bach2g02361	919	SUPERFAMILY	(Trans)glycosidases	342	691	IPR017853	-
	Bach2g02361	919	Pfam	Galactose mutarotase-like	223	299	IPR025887	-
	Bach2g02361	919	CDD	GH31_GANC_GANAB_alpha	353	818	-	-
	Bach2g02361	919	Gene3D	-	774	919	IPR013780	-
	Bach2g02361	919	Gene3D	-	702	773	IPR013780	-
	Bach2g02361	919	Gene3D	glycosyl hydrolase (family 31)	49	353	-	-
	Bach2g02361	919	SUPERFAMILY	Glycosyl hydrolase domain	693	768	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach2g02361	Bach-Chr2	29993088	29997815	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach2g02361	1	919	Glycoside Hydrolase	AT5G63840	75.351	0.0	1481

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach2g02361	K05546		-	cave:132165338	1595.1