Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02304 ATGGCTAGGGTTTTGGCTCAGTCAATTAATGTGCCTGGTCTAGTGGCTAAGCAAAGACATAATCAAAATAGGGGATCAGGAAGGGCCAGAAGACCAGTTAGTATGATGTCTTCTTTAAGTGTGCCTGGATTACGAATAAATGGTTTCTCAGGACTATGTACTTTGAATCCTTTGGACGCCATGCTTAAACCTGGACAAAATTTCCATTCTAAGGTTTCAATTGCAACCTCTTCACGACGATCAAGGGGCAGTAGATTTGTAACTAAAGCCATGTTTGAGCGTTTCACAGAGAAAGCAATCAAAGTGGTTATGCTGGCACAAGAAGAAGCAAGAAGGCTTGGTCACAATTTTGTTGGAACAGAGCAGATTCTGTTAGGTCTTATTGGTGAAGGCACTGGTATTGCTGCTAAGGTTCTAAAGTCTATGGGAATCAACCTTAAAGATGCGCGTGTAGAAGTGGAGAAGATCATTGGAAGGGGTAGTGGATTTGTTGCTGTTGAGATTCCATTTACTCCCCGTGCTAAGCGTGTTTTGGAACTCTCACTGGAGGAAGCCCGCCAAATTGGTCACAATTATATTGGATCAGAGCACTTGCTATTGGGTCTCCTACGTGAGGGTGAAGGTGTAGCAGCTCGTGTTCTTGAAAATCTTGGTGCTGATCCAACTAATATACGCACACAGGTTATTCGAATGGTTGGTGAGAGTGCGGACAGTGTCACTGCTACTGTTGGAACTGGAAGCAGTGGCAATAAGATGCCAACTTTGGAGGAGTATGGTACCAATTTGACCAAGCTAGCAGAGGAGGGAAAACTGGATCCAGTTGTAGGAAGACGAGAGCAAGTAGAACGTGTTACTCAAATTTTAGGTCGTCGAACTAAAAACAATCCTTGTCTGATTGGAGAACCTGGTGTTGGGAAGACAGCTATTGCTGAAGGTCTTGCTCAGCGGATAGCAAATGGTGACGTACCTGAAACCATAGAGGGGAAGAAGGTTATAACCCTGGATATGGGTCTACTTGTAGCTGGAACAAAATATCGTGGAGAGTTTGAGGAGAGATTAAAGAAACTAATGGAGGAAATTAAACAAAGTGATGAGATAATACTTTTTATTGATGAAGTGCACACGCTAATTGGAGCAGGAGCTGCTGAAGGGGCAATTGATGCTGCAAACATATTAAAACCGGCTCTTGCGAGAGGTGAATTGCAGTGTATTGGAGCAACAACGCTGGATGAGTACAGAAAACACATCGAGAAAGATCCAGCTTTAGAGAGGCGATTCCAACCAGTCAAAGTGCCAGAGCCTACTGTTGATGAAACCATTCAAATATTGAAAGGACTTAGAGAACGTTATGAGATTCATCACAAGCTCTGCTATACTGATGAAGCCCTTATATCTGCTGCACAGCTTTCACACCAGTATATCAGTGATCGATTTCTACCTGACAAAGCTATAGACTTGATTGATGAAGCTGGTTCCCGGGTCAGACTTCGTCATGCACAGTTGCCTGAAGAAGCAAGAGAGCTGGACAGGGAGGTTAGACAGATTGTGAAGGAGAAAGAAGAAGCAGTTCGTAACCAAGACTTTGAAAAGGCTGGCGAGCTACGAGATAAAGAAATGGATCTCAAGGCACAGATATCTGCGCTTCTAGATAAAAGCAAGGAGATGAGCAAGGCAGAGAGTGAGGCAGGAGATAGTGGTCCTGTTGTGACTGAATCTGATATTCAACATATCGTTTCCTCCTGGACTGGTATTCCTGTTGAGAAAGTGACAACGGATGAGTCTGATCGCCTCCTTAAGATGGAAGAGACCCTCCACAAGCGAGTCATTGGTCAGGATGAAGCAGTAAAAGCTATCAGTCGGGCTATTCGCCGAGCTCGGGTTGGATTGAAGAATCCAAACCGTCCCATTGCTAGCTTTATCTTTTCTGGTCCAACTGGTGTGGGGAAGTCCGAGCTGGCAAAAGCGTTGGCAGCATACTATTTTGGCTCTGAAGAAGCCATGATCCGGCTTGACATGAGTGAGTTCATGGAGAGGCACACCGTGTCTAAGCTCATTGGATCACCACCAGGATATGTTGGTTACACTGAGGGTGGTCAGCTGACTGAGGCAGTTCGGCGTCGGCCCTACACTGTTGTACTGTTTGATGAAATTGAGAAAGCGCATCCTGATGTATTCAACATGATGCTTCAAATCCTGGAAGATGGTAGGCTAACGGATAGTAAGGGCAGAACTGTGGACTTTAAGAACACGCTTCTTATAATGACATCAAATGTTGGAAGCAATGTGATTGAGAAAGGAGGTCGGCGAATAGGATTTGACCTTGATTATGACGAGAAGGATAGCAGTTATAATCGTATCAAGAGCTTGGTGACTGAGGAACTGAAACAGTATTTTCGGCCAGAGTTTTTGAATAGGTTGGATGAGATGATTGTTTTCAGACAACTCACAAAGCTAGAGGTGAAGGAGATAGGTGATATAATGCTGAAGGAGGTCTTCGAGAGACTGAAGGCCAAAGATATTGAGCTTCAAGTGACGGAGAGATTCAGGGATAGAGTGGTCGAGGAAGGTTACAACCCAAGTTATGGAGCTAGGCCTTTGAGAAGAGCCATAATGAGACTATTGGAAGACAGCATGGCTGAGAAGATGCTGGCAGGAGAGATCAAAGAAGGTGACTCTGTTATAATGGATGTCAATTCTGATGGTAATGTAATTGTGCTTAATGGTAGCAGCGGTGCCCACGAGTCATTACAGGAGCCACTCGCTGTATGA 2769 0.446 MARVLAQSINVPGLVAKQRHNQNRGSGRARRPVSMMSSLSVPGLRINGFSGLCTLNPLDAMLKPGQNFHSKVSIATSSRRSRGSRFVTKAMFERFTEKAIKVVMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQIGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADSVTATVGTGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRREQVERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLCYTDEALISAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELDREVRQIVKEKEEAVRNQDFEKAGELRDKEMDLKAQISALLDKSKEMSKAESEAGDSGPVVTESDIQHIVSSWTGIPVEKVTTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSNVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIGDIMLKEVFERLKAKDIELQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIMDVNSDGNVIVLNGSSGAHESLQEPLAV 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02304 922 ProSiteProfiles UVR domain profile. 509 544 IPR001943 GO:0005515
Bach2g02304 922 Pfam AAA domain (Cdc48 subfamily) 634 808 IPR003959 GO:0005524|GO:0016887
Bach2g02304 922 Gene3D UVR domain 501 565 - -
Bach2g02304 922 Pfam C-terminal, D2-small domain, of ClpB protein 815 894 IPR019489 -
Bach2g02304 922 PANTHER ATP-DEPENDENT CLP PROTEASE 96 902 - -
Bach2g02304 922 Coils Coil 346 366 - -
Bach2g02304 922 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 746 760 IPR001270 GO:0005524
Bach2g02304 922 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 713 731 IPR001270 GO:0005524
Bach2g02304 922 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 639 657 IPR001270 GO:0005524
Bach2g02304 922 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 684 702 IPR001270 GO:0005524
Bach2g02304 922 Pfam AAA lid domain 435 537 IPR041546 -
Bach2g02304 922 Gene3D - 91 240 IPR036628 -
Bach2g02304 922 ProSiteProfiles Clp repeat (R) domain profile. 92 234 IPR004176 -
Bach2g02304 922 Pfam ATPase family associated with various cellular activities (AAA) 297 413 IPR003959 GO:0005524|GO:0016887
Bach2g02304 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 584 901 IPR027417 -
Bach2g02304 922 ProSitePatterns Chaperonins clpA/B signature 2. 669 687 IPR028299 -
Bach2g02304 922 FunFam ATP-dependent chaperone ClpB 815 908 - -
Bach2g02304 922 Pfam Clp amino terminal domain, pathogenicity island component 182 233 IPR004176 -
Bach2g02304 922 Pfam Clp amino terminal domain, pathogenicity island component 106 158 IPR004176 -
Bach2g02304 922 Gene3D - 587 813 IPR027417 -
Bach2g02304 922 SMART AAA_5 635 777 IPR003593 GO:0016887
Bach2g02304 922 SMART AAA_5 292 432 IPR003593 GO:0016887
Bach2g02304 922 ProSitePatterns Chaperonins clpA/B signature 1. 387 399 IPR018368 GO:0005524
Bach2g02304 922 Gene3D - 815 915 - -
Bach2g02304 922 FunFam ATP-dependent Clp protease subunit 588 813 - -
Bach2g02304 922 SUPERFAMILY Double Clp-N motif 93 234 IPR036628 -
Bach2g02304 922 FunFam ATP-dependent Clp protease ATP-binding subunit 436 521 - -
Bach2g02304 922 Gene3D - 243 435 IPR027417 -
Bach2g02304 922 SMART ClpB_D2_small_2 815 905 IPR019489 -
Bach2g02304 922 Coils Coil 505 525 - -
Bach2g02304 922 CDD RecA-like_ClpB_Hsp104-like 596 812 - -
Bach2g02304 922 CDD AAA 275 427 - -
Bach2g02304 922 FunFam ATP-dependent Clp protease ATP-binding subunit ClpC 91 239 - -
Bach2g02304 922 FunFam Chaperone clpB 1, putative 244 435 - -
Bach2g02304 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 529 IPR027417 -
Bach2g02304 922 Gene3D - 437 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02304 Bach-Chr2 29593189 29597755 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02304 K03696 - gmx:100804035 1649.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g02304 2 29593189 29597755 Bach2g02304 2 29593189 29597755 ECH