Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01997 ATGCTATTGAGATCAGCATCATCCTCACAGTCTTCTGCTTCTGCACCAGTATCTCCCTCTGACTTGTGTATAATAAATACAGTTCTCGGTTGCAGAACCACTAACGAAGCACTTGAGTGCTTCAATGAGGCCTCCAAACGAGTTAATCCAGCGAAAAGTCCCCAGCTTTACGCTGCTAACATCCACATCTTAACGGGCGCCAAGCTGTATAGAGAAGCTAGGTTCTTGACTAAAATCCTCTTTCAGAAGCTCCGAAAATCACGGAAACCCCATGGTGCTTGCCGTTTTCTTTTCGAGGCTCTCAACCGCTTTGAGAGCTCCAAATTCACTCCCGATGTATTTGGTGTGCTGATCATTGCCTGCTGTGAGATGGCTCTCGTTGAGGAAGCCTTGTGGGTTTATCGGCAGATAAGGGCTCTACCTGCGCTGCATGCTTGCTATGCACTTCTGCATGGGTTGGTTAAGATAGGTGAGTTGGATTTGATGTGGGATATATATGAGGACTTGGCGTCGCGCGGTCTTTCTCCTACTGTTATCACCTATGGCATATTAATCAATTGTTGTTGTAATCAAGGAGATACGATGAGGGCACGTAAGTTGTTTGATGAAATGATTGAGAAGGGGATTCAACCGACAGTAGTGATCTACACAACTCTTATACGCGTCCTTTGCAATGAGAGTAACATGGCGGAAGCCGAGTCCATGTTTAGATTGATGAGAGACTCTGGCGTGGCTCCGAATTTGTATACTTACAATACAATTATGGATGGGTATTGCAAAATCACTGATGTTAGGAGAGCCATTGACTTGTTTAAAGACATGCTACATCATGGCTTGCATCCAGATATTGTGACGTTTGCTATTTTAATAGATATTCTGTGCAAATTGGGCGAAATGAAGGCTGCTCAGGATTTTTTTAGTTTGATGGAAAAATTTGGTGTTGTTCCTAATACGTATGTTTACAATTCTTTGATTTACGGGTACTGTAAGGCTGGGAACTTGCCTGGAGCAATGCATTTGCAAACAGAAATGGGAAGGTCTGAAATCATGCCAGATGTTGTCACTTACAGCATACTCATTAAAGGCCTGGCTGACTCAAGTAGACTGGAAGAAGCTAATGATTTACTACAGAAAATGCAAACAGCAGGAGTCCTAGCAAATTCTGCAACATACAATGTGATAATTGATGGATACTGTAAAGAAGGAAACATGGAGAAGGCTATTGATGTGTGTTCTCAAATGACTGAAAGGAAAATAGAACCCAATGTCATCACATTCTCTACATTGATTGATGGCTTTTGCAAGATAGGAAACACAAAAGCTGCAATGGGATTGTACACAGAAATGGTTATCAAAGGTATTCAGCCTGATGTGGTTGCTTACACAGTTTTGATTGATGGGCACTGTAAGGATGGAAACACAAAAGAGGCTCTCAGGCTGCATAAGGAAATGCTAGATACAGGACCCATGCCCAATGTGTTTACGCTTAGTTGTTTGATTGATGGCCTTTTTAAAGAGGGAAAGACGAATGATGCAATCAAATTATTCTTGGAGATAACTGGAGCTCATCAATCTAAAGATAAGATGGATAAATTGGATAAGAGCTATTGTGCTCCAAACAACGTTATGTATGCCATTCTAATTCAAGGTTTGTGTAATGATGGACAGATCTTTAAGGCCACCAAGTTTTTTGCAGATACGAGATATCATGGCTTACAACCAGACGTGTTACTTTATGTTACGATGTTGAAGGCACATTTCCGATACAAGCACATGCTTGATGTTATGATGCTGCATGCAGACATTCTAAAGGTGGGCTTCATGCGAAATTCTTCCATATGTTGTGTGTTGTCTGAGGGCTATCAAGAAAATGGATACCTGAAATCAGCTCATATGTTTTCTGGGCATTTGATGGAGTATGGTCTTCAGTGTTCTAGAGAAGGATGA 1947 0.4155 MLLRSASSSQSSASAPVSPSDLCIINTVLGCRTTNEALECFNEASKRVNPAKSPQLYAANIHILTGAKLYREARFLTKILFQKLRKSRKPHGACRFLFEALNRFESSKFTPDVFGVLIIACCEMALVEEALWVYRQIRALPALHACYALLHGLVKIGELDLMWDIYEDLASRGLSPTVITYGILINCCCNQGDTMRARKLFDEMIEKGIQPTVVIYTTLIRVLCNESNMAEAESMFRLMRDSGVAPNLYTYNTIMDGYCKITDVRRAIDLFKDMLHHGLHPDIVTFAILIDILCKLGEMKAAQDFFSLMEKFGVVPNTYVYNSLIYGYCKAGNLPGAMHLQTEMGRSEIMPDVVTYSILIKGLADSSRLEEANDLLQKMQTAGVLANSATYNVIIDGYCKEGNMEKAIDVCSQMTERKIEPNVITFSTLIDGFCKIGNTKAAMGLYTEMVIKGIQPDVVAYTVLIDGHCKDGNTKEALRLHKEMLDTGPMPNVFTLSCLIDGLFKEGKTNDAIKLFLEITGAHQSKDKMDKLDKSYCAPNNVMYAILIQGLCNDGQIFKATKFFADTRYHGLQPDVLLYVTMLKAHFRYKHMLDVMMLHADILKVGFMRNSSICCVLSEGYQENGYLKSAHMFSGHLMEYGLQCSREG 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 282 316 IPR002885 -
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Bach2g01997 648 Gene3D Tetratricopeptide repeat domain 309 381 IPR011990 GO:0005515
Bach2g01997 648 Gene3D Tetratricopeptide repeat domain 451 523 IPR011990 GO:0005515
Bach2g01997 648 Gene3D Tetratricopeptide repeat domain 382 450 IPR011990 GO:0005515
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 387 421 IPR002885 -
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 422 456 IPR002885 -
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 352 386 IPR002885 -
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 317 351 IPR002885 -
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 457 491 IPR002885 -
Bach2g01997 648 SUPERFAMILY HCP-like 186 489 - -
Bach2g01997 648 Pfam PPR repeat family 246 295 IPR002885 -
Bach2g01997 648 Pfam PPR repeat family 387 435 IPR002885 -
Bach2g01997 648 Pfam PPR repeat family 456 505 IPR002885 -
Bach2g01997 648 Pfam PPR repeat family 316 364 IPR002885 -
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 212 246 IPR002885 -
Bach2g01997 648 Gene3D Tetratricopeptide repeat domain 524 647 IPR011990 GO:0005515
Bach2g01997 648 Gene3D Tetratricopeptide repeat domain 197 308 IPR011990 GO:0005515
Bach2g01997 648 Gene3D Tetratricopeptide repeat domain 23 196 IPR011990 GO:0005515
Bach2g01997 648 Pfam PPR repeat 114 138 IPR002885 -
Bach2g01997 648 Pfam PPR repeat 207 240 IPR002885 -
Bach2g01997 648 Pfam PPR repeat 172 204 IPR002885 -
Bach2g01997 648 Pfam PPR repeat 537 564 IPR002885 -
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 142 176 IPR002885 -
Bach2g01997 648 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 540 574 IPR002885 -
Bach2g01997 648 PANTHER MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE 33 422 - -
Bach2g01997 648 NCBIfam pentatricopeptide repeat 179 213 IPR002885 -
Bach2g01997 648 NCBIfam pentatricopeptide repeat 145 178 IPR002885 -
Bach2g01997 648 NCBIfam pentatricopeptide repeat 214 247 IPR002885 -
Bach2g01997 648 NCBIfam pentatricopeptide repeat 249 283 IPR002885 -
Bach2g01997 648 NCBIfam pentatricopeptide repeat 424 458 IPR002885 -
Bach2g01997 648 NCBIfam pentatricopeptide repeat 284 318 IPR002885 -
Bach2g01997 648 NCBIfam pentatricopeptide repeat 319 353 IPR002885 -
Bach2g01997 648 NCBIfam pentatricopeptide repeat 390 423 IPR002885 -
Bach2g01997 648 NCBIfam pentatricopeptide repeat 354 387 IPR002885 -
Bach2g01997 648 NCBIfam pentatricopeptide repeat 459 492 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01997 Bach-Chr2 27582451 27584397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01997 111 647 Glycosyltransferase AT1G05670 27.860 7.11e-72 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01997 - - pcin:129307667 882.093