Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01571 ATGGAGGGTACCCTTTTCCCAAACAGGCCAGTCTATTCTGTCCCTGTAAACAGACCAACCCATCCAAGCTCCACTGTGAAATTCAATTCATCGTTACTGCCACCGCCTCCTCCTCCTCACTCCCCAGCTCCTCTTTCATTTCATTTGGATTCGCTCCTCCAACACCTTCAGCGCCTCTCTGCAACTCCCATCACCACTAACAAGCCGAGACTTGATAGCCCACTTGAGGAAAAAAATGCCCATTTCGCCTCTCTTCAAATCCCCGTTGATCCAACCGAACTTCAGCACCAGCAAGCCCATAGAAAGAGACTCACTTCAGTTTCAGTCCCGCGAAATGATGGCAACGAAACAGAGGTTCAAACTGAGGGTGGTAATCTTGAGTTTCTATCCACCAGGGGTAAGTTGATGCTCAATTCAATTGTGGAAACGCCTTCGCATAGTTTAAATGACTTCTTCAACTCCGCCGAGTTTGAGTTGCATGAAATTGATTTTCCTAGCCTCTTGAAAGCGCTAGACTTATCAGGTAATTGGGAAAGAGCCCTTTTCTTGTTTGAATGGGTTGCATTGCATTTAAAATCCGAACATTTGAAGCTAGACAATCAGGTTGTTGAAATTATGGTTAGGATCCTGGGGAGAGAATCACAGCATTCAATTGCTTGCAAGCTGTTTGATATAATTCCTCTTGAAGAGTATTCACTTGATGTCCGGGCCTATACGACTATTCTTCACGCATATGCTCGCACTGGTAAGCATAAGCGAGCTATTGCTATCTTTGAGAAAATGAAGGAGACTGGTCTTTCTCCAACTTTGGTCACTTACAATATTATGCTTGATGTTTATGGCAAAATGGGTCGTTCCTGGAATATAATCTTAGACCTCTTAGATGAAATGAGAAGTAAAGGACTTGAATTTGATGAGTTCACCTGCAGCACGGTGATATCTGCTTGCGGAAGAGAGGGTATGCTAGATGAAGCAAGAAACTTTTTTGCTGAGTTAAAATTGAATGGCTATAAACCAGGAACTGTGAGCTATAACTCTTTGTTGCAAGTATTTGGGAAGGCAGGGATCTACACAGAGGCCTTGAGCATCTTAAAAGAAATGGAGGACAATAATTGCCCACCTGATTCTTTTACTTACAACGAAGTTGTGGCAGCATATGTAAGAGCTGGATTTTATGATGAAGGGGCTGCTGTCATAGATACAATGACCCAAAAAGGAGTAATGCCAAATGCTGTTACTTATACCACTGTAATAAATGCCTATGGGAAGGCAGGAAAGGAGGATGAAGCCCTAAAGTTGTTCAACCAGATGAAGGAGTTGGGTTGTGTTCCAAATGTATGTACATACAATTCTATTCTTGGAATGCTTGGCAAGAAGTCAAGATCAGAGGATATGATAAAGATTCTCTGTGATATGAAATTGAATGGATGTGCTCCAAATCGAATTACATGGAACACCATGCTCGCTGTATGTGGTGAGAAGGGTAAGCACAAGTATGTGGGCCAGGTTTTAAGGGAAATGAGGAACTGTGGGTTTGAGCCCGACAGAGATACGTTCAATACATTAATTAGTGCATATGGTCGGTGTGGATCTGAAATAGATGCCGCAAAAATGTATGGGGAAATGGTTAAAGCAGGCTTCACTCCATGTGTAACAACTTATAATGCTCTTCTAAATGCTCTTGCTCGGCGAGGTGATTGGAAAGCAGCAGAATCTGTCATTCTTGACATGAGGAGAAAGGGCTTCAAGCCTAATGACACTTCGTACTCACTGATGCTCCATTGTTATTCTAAAGGTGGGAATGTCAGGGGAATAGGGAAGATTGAGAAAGAAATTTATGATGGTCATGTCTTTCCAAGTTGGATGCTCTTGAGAACCTTTGTCATTGCAAACTTCAAGTGCCGAGAACTTAAAGGAATGGAGAGGGCATTTGAGCAATTGCAAAAGAATGGATACAAACCTGATTTGGTCTTAATTAACTCCATGCTTTCTATGTTCGCCCGAAACAAGATGTATAACAGAGCCCATGAAATGCTGCATTTTATCCAGAAAAGCGGGCTACAGCCAGATCTCGTGACCTATAATAGCTTAATGGACATGTATGCCCGAGGTGGTGAGTGTTGGAAAGCTGAAGAAGTGCTCGAGGGAATTCAAAAATCTGGGCAGAAGCCTGATCTTGTGTCTTATAACACTGTCATCAAGGGATTTTGTAGGCGAGGGCTCATGCAGGAGGCTATTAGAATTCTCTCAGAGATGACAACTAATGGCATTCGACCATGTATTTTCACATACAATACTTTCTTGGCAGGCTATGTGAAGCTGGGATTGTTTACAGAGGTAGATGAAGTTATCAGATATATGATTGAGCACAATTGCAGGCCCAATGAGCTAAGTTACAAGATTGTAGTTGATGGTTATCGTGGAGCAAGGAAACATGACGAAGCCTTGGACTTTGTCTCTAAGATTAAGGACATTGATGGTTCTATCGATGATCAAACTGTGAAAAGGTTATCTTCTCGCATTAGGGAGAGTTTGGAATCATGA 2544 0.4233 MEGTLFPNRPVYSVPVNRPTHPSSTVKFNSSLLPPPPPPHSPAPLSFHLDSLLQHLQRLSATPITTNKPRLDSPLEEKNAHFASLQIPVDPTELQHQQAHRKRLTSVSVPRNDGNETEVQTEGGNLEFLSTRGKLMLNSIVETPSHSLNDFFNSAEFELHEIDFPSLLKALDLSGNWERALFLFEWVALHLKSEHLKLDNQVVEIMVRILGRESQHSIACKLFDIIPLEEYSLDVRAYTTILHAYARTGKHKRAIAIFEKMKETGLSPTLVTYNIMLDVYGKMGRSWNIILDLLDEMRSKGLEFDEFTCSTVISACGREGMLDEARNFFAELKLNGYKPGTVSYNSLLQVFGKAGIYTEALSILKEMEDNNCPPDSFTYNEVVAAYVRAGFYDEGAAVIDTMTQKGVMPNAVTYTTVINAYGKAGKEDEALKLFNQMKELGCVPNVCTYNSILGMLGKKSRSEDMIKILCDMKLNGCAPNRITWNTMLAVCGEKGKHKYVGQVLREMRNCGFEPDRDTFNTLISAYGRCGSEIDAAKMYGEMVKAGFTPCVTTYNALLNALARRGDWKAAESVILDMRRKGFKPNDTSYSLMLHCYSKGGNVRGIGKIEKEIYDGHVFPSWMLLRTFVIANFKCRELKGMERAFEQLQKNGYKPDLVLINSMLSMFARNKMYNRAHEMLHFIQKSGLQPDLVTYNSLMDMYARGGECWKAEEVLEGIQKSGQKPDLVSYNTVIKGFCRRGLMQEAIRILSEMTTNGIRPCIFTYNTFLAGYVKLGLFTEVDEVIRYMIEHNCRPNELSYKIVVDGYRGARKHDEALDFVSKIKDIDGSIDDQTVKRLSSRIRESLES 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01571 847 SUPERFAMILY HCP-like 235 441 - -
Bach2g01571 847 FunFam Pentatricopeptide repeat-containing protein At1g74850, chloroplastic 285 387 - -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 410 444 IPR002885 -
Bach2g01571 847 PANTHER ATPASE EXPRESSION PROTEIN 3 24 496 - -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 760 794 IPR002885 -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 655 689 IPR002885 -
Bach2g01571 847 Gene3D Tetratricopeptide repeat domain 287 403 IPR011990 GO:0005515
Bach2g01571 847 Gene3D Tetratricopeptide repeat domain 471 625 IPR011990 GO:0005515
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 375 409 IPR002885 -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 725 759 IPR002885 -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 269 304 IPR002885 -
Bach2g01571 847 MobiDBLite consensus disorder prediction 1 42 - -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 480 514 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 692 725 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 412 446 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 762 796 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 727 759 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 447 480 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 237 269 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 307 340 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 518 549 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 342 376 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 482 515 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 377 411 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 271 305 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 659 690 IPR002885 -
Bach2g01571 847 NCBIfam pentatricopeptide repeat 553 585 IPR002885 -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 340 374 IPR002885 -
Bach2g01571 847 Gene3D Tetratricopeptide repeat domain 136 286 IPR011990 GO:0005515
Bach2g01571 847 Pfam PPR repeat 307 336 IPR002885 -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 690 724 IPR002885 -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 550 584 IPR002885 -
Bach2g01571 847 Pfam PPR repeat 721 753 IPR002885 -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 305 339 IPR002885 -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 234 268 IPR002885 -
Bach2g01571 847 Gene3D Tetratricopeptide repeat domain 633 753 IPR011990 GO:0005515
Bach2g01571 847 Gene3D Tetratricopeptide repeat domain 754 826 IPR011990 GO:0005515
Bach2g01571 847 Gene3D Tetratricopeptide repeat domain 404 470 IPR011990 GO:0005515
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 515 549 IPR002885 -
Bach2g01571 847 Pfam Pentatricopeptide repeat domain 233 283 IPR002885 -
Bach2g01571 847 Pfam Pentatricopeptide repeat domain 398 458 IPR002885 -
Bach2g01571 847 Pfam Pentatricopeptide repeat domain 467 527 IPR002885 -
Bach2g01571 847 MobiDBLite consensus disorder prediction 102 122 - -
Bach2g01571 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 445 479 IPR002885 -
Bach2g01571 847 Pfam PPR repeat family 549 597 IPR002885 -
Bach2g01571 847 Pfam PPR repeat family 759 806 IPR002885 -
Bach2g01571 847 Pfam PPR repeat family 339 385 IPR002885 -
Bach2g01571 847 Pfam PPR repeat family 654 703 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01571 Bach-Chr2 24569393 24571936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01571 320 823 Glycosyltransferase AT1G05670 24.554 4.86e-47 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01571 K17710 - qsa:O6P43_002839 1308.89