Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01570 ATTGTCCGCGCGCGCCTTCCGGCGATCTTTCACAATGGAAGCTCCATCGGAGCCAGCAGCTACGGCCACCGGCGAGGTTATAAGCAAGAATGCATTGAAGCGGGAGCTCAAGAACAAACAGAGAGAAGAGGAAAGGAGGCGCAAGGAGGAAGAGAAGGCTAAGAAGGCAGCTGAAATGCAATCTAAGAAACCTACCACAGCCACAGGTGAAGACGAAGATATGGACCCAACGCAATACCATGAAAATAGGCTAAAGTATCTTGTAGCTCAGAAGGCAGATGGAAGAAACCCATATCCTCACAAATTCTTTACCTCTATGTGTATTAATGAATACATTGAGAAATATAAAGGATTAAGCAATGGGGAGCACCTTGAAGATGTGTCTGTGTCATTAGCGGGCCGAATCATGAACAAACGTTCATCAGGTGGGAAGCTGTGGTTCTATGACCTACATGGTGCTGGGTATAAACTTCAAGTCATGGCTGATGCAAGCAAGTCTGATTTGGATGAGGCTGAATTTTCCAAGTTCCATGCTAATGTAAAGCGTGGTGATATAGTTGGTGTCACTGGATTTCCAGGGAAAAGTAAGAAGGGAGAACTTAGCATTTTCCCCAAGATGTTTATAGTGTTGTCTCATTGTCTGCATATGATGCCAAGGCAAAAATCTGGTGCTGCTGCTGATCTGCAGAAAAATGTGTGGATACCAGGAAGTACCCGGAATCCTGAAAATTACATCTTAAAGGATCAGGAAACAAGATATCGATTACGCCATCTGGATTTGATGCTGAATCCAGAGGTTCGAGAAATATTCAAGACCAGGAGTAAAATCATTTCTTATATTAGGAGGTTCCTTGATGACCTTGATTTCTTGGAGGTTGAGACACCTATGATGAACATGATTGCCGGTGGAGCAGCAGCACGTCCTTTTGTTACTCATCACAATGAACTTAACATGAGATTATTCATGCGAATCGCTCCAGAACTCTATCTTAAGGAACTAGTTGTTGGTGGGCTGGACCGTGTTTATGAAATTGGAAAACAATTCAGGAATGAAGGTATAGATTTGACACACAATCCTGAGTTCACTACCTGTGAGTTCTATATGGCTTATAAGGACTACAATGACCTAATGGAGATTACAGAGCAAATGTTGAGTGGGATGGTCAAGGAACTTACAAAGGGAAGCTATAAAATCAAATACCATGCAAATGGAGTTGATAAGGATCCAATTGAGATTGACTTTACTCCACCATTCAGAAGGATTGACATGATAGAGGAATTAGAGAAAATGGCAGGCCTCAGTATTCCCAAGGACTTATCCAGTGAGGAAGCTAATCAATATCTTAAAGATGCATGTTTGAAGTATGACATCAAATGCCCTCCCCCTGAGACAACAACAAGATTGTTGGACAAACTTGTGGGGCACTTTTTGGAAGAAACGTGTGTGAATCCTACCTTCATCATAAACCATCCTGAGATAATGAGTCCATTGGCTAAGTGGCACAGATCGAAACCTGGTCTTACTGAACGTTTTGAATTGTTTGTTAATAAACATGAACTCTGCAATGCGTATACTGAATTGAATGACCCTGTTGTACAACGTCAGCGATTTGCTGAACAGCTCAAGGATAGGCAATCAGGTGATGATGAAGCAATGGCCTTAGATGAAACATTTTGTACGGCTCTGGAGTATGGTCTTCCGCCAACAGGTGGTTGGGGTTTGGGTATTGATCGGTTGACTATGTTGCTGACTGATTCACAGAATATTAAGGAGGTTCTCCTCTTCCCTGCCATGAAACCTCAAGATTGA 1810 0.4254 MEAPSEPAATATGEVISKNALKRELKNKQREEERRRKEEEKAKKAAEMQSKKPTTATGEDEDMDPTQYHENRLKYLVAQKADGRNPYPHKFFTSMCINEYIEKYKGLSNGEHLEDVSVSLAGRIMNKRSSGGKLWFYDLHGAGYKLQVMADASKSDLDEAEFSKFHANVKRGDIVGVTGFPGKSKKGELSIFPKMFIVLSHCLHMMPRQKSGAAADLQKNVWIPGSTRNPENYILKDQETRYRLRHLDLMLNPEVREIFKTRSKIISYIRRFLDDLDFLEVETPMMNMIAGGAAARPFVTHHNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYKDYNDLMEITEQMLSGMVKELTKGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEELEKMAGLSIPKDLSSEEANQYLKDACLKYDIKCPPPETTTRLLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRSKPGLTERFELFVNKHELCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAMKPQD 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01570 591 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 259 589 IPR006195 -
Bach2g01570 591 CDD LysRS_N 117 249 IPR044136 GO:0000166
Bach2g01570 591 CDD LysRS_core 252 589 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Bach2g01570 591 SUPERFAMILY Class II aaRS and biotin synthetases 237 588 IPR045864 -
Bach2g01570 591 PIRSF LysRS2 2 591 IPR034762 GO:0004824|GO:0005524|GO:0006430
Bach2g01570 591 Coils Coil 18 49 - -
Bach2g01570 591 Pfam tRNA synthetases class II (D, K and N) 237 587 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bach2g01570 591 Pfam OB-fold nucleic acid binding domain 118 192 IPR004365 GO:0003676
Bach2g01570 591 MobiDBLite consensus disorder prediction 19 65 - -
Bach2g01570 591 NCBIfam lysine--tRNA ligase 228 590 IPR002313 GO:0004824|GO:0005524|GO:0006430
Bach2g01570 591 SUPERFAMILY Nucleic acid-binding proteins 63 207 IPR012340 -
Bach2g01570 591 PANTHER LYSYL-TRNA SYNTHETASE 15 591 - -
Bach2g01570 591 MobiDBLite consensus disorder prediction 1 65 - -
Bach2g01570 591 Hamap Lysine--tRNA ligase [lysS]. 71 590 IPR002313 GO:0004824|GO:0005524|GO:0006430
Bach2g01570 591 FunFam Lysine--tRNA ligase 233 591 - -
Bach2g01570 591 FunFam Lysine--tRNA ligase 65 208 - -
Bach2g01570 591 Gene3D Bira Bifunctional Protein; Domain 2 233 591 IPR045864 -
Bach2g01570 591 Gene3D - 66 208 IPR012340 -
Bach2g01570 591 PRINTS Lysyl-tRNA synthetase signature 319 332 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Bach2g01570 591 PRINTS Lysyl-tRNA synthetase signature 274 284 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Bach2g01570 591 PRINTS Lysyl-tRNA synthetase signature 290 306 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Bach2g01570 591 PRINTS Lysyl-tRNA synthetase signature 472 488 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Bach2g01570 591 PRINTS Lysyl-tRNA synthetase signature 337 354 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01570 Bach-Chr2 24560777 24565920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01570 K04567 - gmx:100785660 1033.09