Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01554 ATGTTGTTCCACACGAGAAGGTTTTGTTCTTTCTCCTCTTCAACCATTTCTTCTTCTACTGACTACAAAACCTCTTCTCTTCAGACATTACTCAAAAGCGGCTTCACACCCACACTCAAATCGATTAACCGATTCCTTCTCTTCCTCTTCCGGATCCAGAAGCTCGACTTAATCATTCACTTCTTCTCCCAGTTAAACTCTAACAAAATCGATGGCAATCATCGAACTCACTCAGTCTTCACATGGGCACTCCTCAAATCTCAGAAATTTGAAGAAGCAGAGTTGTTCATGAAGACTCACATCATTAAATCTTCCGAATTTCCCATAAATCGTATGTGGGACACTCTAATCCGGGGCCTTTGCAACACACGAGAAGAACCAGAAAAAGCACTCTCCATATTAAGGGATTGTTTGAGGAACCGCGATGTGTTGCCGTCTTCTTTCACTTTTTGTTCAATAATTCATAAGTTAAGCTCCCAGGGTAACATGGGCAAGGCAATCGAAGTGCTTGAGTTGATGACAGATGAGCAAGTCAAGTACCCTTTTGATAATTTCGTTTGTAGTTCGGTGATTTCAGGGTTTTGTAGGGTTGGAAAACCGGAACTTGCGTTGAGTTTTTTCGAGAGTGCTACAAATTCTAGAGCTTTGCACCCTAATATCGTGACTTATACAGCACTTGTAGGTGCTCTTTGTAAGTTGGGAAGAGTCAATGAGGTATGTGACTTGGTTTCTGAGATGGAAAAGGAAGGGTTGGCTTTTGATGTTGTTTTCTATAGCAGCTGGGTTTGTGGTTATATTGAAGAGAAGGTTCTGTTGGAGGTGCTGAGGAAGATGAAAGAAATGGTAGAAAAGGGTATAGAACACGATACCATCAGCTATACCATACTCATAGATGGGTTTTCCAAGTTAGGAGATGTGGAAAAGGCCGTTGGCTTCTTAGCCAAAATGTTTAAAGAAGGAAAGAATCCCAATATGGTTACATACACTGCAATTGTATCAGCATATTGTAAGAAGGGAAAATTGGAGGAAGCTTTGGCTATTTTCAATAGCGTCAAAGACACAAGAATTGAACTGGATGAATTTATATTTGCCACTTTAATTGATGGATTTAGCCAGAGAGGAGATTTCAATAATGTGTTTCATCTGTTTGATGAAATGGAGCAAAGGGGGATTAGTCCTAGTATTGTTACTTACAATACTGTAATAAATGGATTGTGCAAGTTTGGGATGACTTCTGAAGCAAATGATTTCTCAAAACATGCCGCTGCAGATAAGATTACATACAGTACCTTGTTGCATGGGTATACAATGGAAGAGAACATCCCAGGGATTTTGCAAACAAAAAGGCGCCTAGAAGAAGCCGGTATCTCTATGGATGTTATAATGTGTAATGTGCTCCTCAAAGCACTGCTTATGGTAGGGGCATATGAAGATGTTTATGCTCTCTACAAAGCAATGCCAACGATGGATCTGATTGCTGACTCTGTAACTTTTTGTACAATGATTGATGGCTATTGCAAGGTAGGTAGAATTGATGAGGCACTTGAGATATTTGATGATTTCCGAAAGACATCAATTTCTTCGTGTGCGTGCTACAATAGTATTGTTAATGGTCTCTGCAAGAAGGGTATGGTGGAAATGGCCACTGAAGCATTGATTGAACTCAATGATAAAGGTCTGGAGTTGGATATAGGTATGTTCAAGATGTTAATGAAGACAATTTGTAAAGAAAAAGGTGCAAAAGAGGTTCTAGATTTAGTTTACAGAATGGAAGCATTGGGGCCCGACAAGTATAATACAGTGTGTAATTATTTTATCTTGTTATTTTGTAAAAGAGCATTAGTTGAAGACGCAAATCAATTGTGCGTGATGATGAGGAAGAAAGGCTTAACTGTCACAAGCAAGTCTTATTATTTACTTTTAAGAAGGCATATTAATGATGGAAAATGGAAGCAAAGTCTGCCTATCTTAAATGTCTTTCTGAAAGAATATGGCCTACTTGAACCAAGGGTGCAAAAGATACTTGTGCAGTACCTTTGTCTGAGGAACGTCGATACTGCCCATCGAGTTCTTGGAAAAACATTGGATAACTCTTCAACATTCACTTTTCCCGTTTCTATTCTCAAGGTTCTCTTAAAGGAGGGTAGAGTTTTAGATGCGTATAAGCTTGTCATGGAGGCTCGACATACTTTACCAGTCATGAACGTTGTTGATTACTCAATTGTGATTGCTGGCTTATGCAAGGGAGGCTATGTCAATAAAGCATTGGATCTTTGTGCCTTTGTTGAAAAGAAGGGGATCACCTTGAACATAGTCTCTTATAATTCAATTATGAAAGGTTTGTTGCACGAGGGATGTCTTATTGAAGCATTCCGACTATTCGATTCGTTAGAGAAAATCGATTTGATACCTTCAGAAGTCACTTACGCTACATTAATTTATGCTCTATGCAGAGAGGGATTTCTGCTTGATGCAAAGCATGTTTTTGGGAAAATGGTCCTCAAGGGCTTTCAACCAAATATACAAGTTTATAATTCATTACTTGATGGTTTTTCTAAGTTTGGTCAATTAGAGGAGGCCTTCAAGCTTTTAAATGATATGGAGACAAAATTTATGGAGCCTGACGGTTTTACTGTCAGTGCTGTAATAAATTGCTATTGCCAGAAGGGTGAAATGGAAGCGGCACTTGCATTCTTTTCTGAGTTCAAGAGGAAAGGCATATCACCTGATTTTTTGGGTTTCTTATATTTGATTAGAGGTCTATGTGGCAAAGGAAGGATGGAAGAAACCAGGAATGTGTTGAGGGAAATGCTCCAGTACAAGCCTGTCATGGACTTGATCAACATAGTCAACGCTGAGGTTGAGACAGAGTCAATAGGAGATTTTCTTGTCTTTTTGTGTGAACAAGGAAGCATTCAAGAAGCTGTTACAGTTCTAAATGAAATTGCACATATGCTTTTTCCTGTTCGGAGATTGTCCACTTCTAATCAAGGATCCCATATACTTCAGAATATTAATGAAAGGAAGGATTTTGCTTCAGATTCTTCAATGCCTCGACTTACCTCAAATAAAACTGATATGGATTTGGAATCTTGTGATTCAAGGGAAAGTAGGAATGTTTTGCCAAATCATGGTAGTCATGTGCGAAGATCTCAGTCAAACAACTTTGACTTCTATTATTCTGAAATGGCTGCTCTCTGTTCCAGAGGAGAGTTGCAGAAGGCTACTCGATTAACAAAAGAAATGCTTTCTGAACTGACAGAATCTATGAACTGA 3276 0.3889 MLFHTRRFCSFSSSTISSSTDYKTSSLQTLLKSGFTPTLKSINRFLLFLFRIQKLDLIIHFFSQLNSNKIDGNHRTHSVFTWALLKSQKFEEAELFMKTHIIKSSEFPINRMWDTLIRGLCNTREEPEKALSILRDCLRNRDVLPSSFTFCSIIHKLSSQGNMGKAIEVLELMTDEQVKYPFDNFVCSSVISGFCRVGKPELALSFFESATNSRALHPNIVTYTALVGALCKLGRVNEVCDLVSEMEKEGLAFDVVFYSSWVCGYIEEKVLLEVLRKMKEMVEKGIEHDTISYTILIDGFSKLGDVEKAVGFLAKMFKEGKNPNMVTYTAIVSAYCKKGKLEEALAIFNSVKDTRIELDEFIFATLIDGFSQRGDFNNVFHLFDEMEQRGISPSIVTYNTVINGLCKFGMTSEANDFSKHAAADKITYSTLLHGYTMEENIPGILQTKRRLEEAGISMDVIMCNVLLKALLMVGAYEDVYALYKAMPTMDLIADSVTFCTMIDGYCKVGRIDEALEIFDDFRKTSISSCACYNSIVNGLCKKGMVEMATEALIELNDKGLELDIGMFKMLMKTICKEKGAKEVLDLVYRMEALGPDKYNTVCNYFILLFCKRALVEDANQLCVMMRKKGLTVTSKSYYLLLRRHINDGKWKQSLPILNVFLKEYGLLEPRVQKILVQYLCLRNVDTAHRVLGKTLDNSSTFTFPVSILKVLLKEGRVLDAYKLVMEARHTLPVMNVVDYSIVIAGLCKGGYVNKALDLCAFVEKKGITLNIVSYNSIMKGLLHEGCLIEAFRLFDSLEKIDLIPSEVTYATLIYALCREGFLLDAKHVFGKMVLKGFQPNIQVYNSLLDGFSKFGQLEEAFKLLNDMETKFMEPDGFTVSAVINCYCQKGEMEAALAFFSEFKRKGISPDFLGFLYLIRGLCGKGRMEETRNVLREMLQYKPVMDLINIVNAEVETESIGDFLVFLCEQGSIQEAVTVLNEIAHMLFPVRRLSTSNQGSHILQNINERKDFASDSSMPRLTSNKTDMDLESCDSRESRNVLPNHGSHVRRSQSNNFDFYYSEMAALCSRGELQKATRLTKEMLSELTESMN 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 494 528 IPR002885 -
Bach2g01554 1091 Gene3D Tetratricopeptide repeat domain 10 175 IPR011990 GO:0005515
Bach2g01554 1091 Gene3D Tetratricopeptide repeat domain 820 1022 IPR011990 GO:0005515
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 840 874 IPR002885 -
Bach2g01554 1091 Pfam PPR repeat family 185 232 IPR002885 -
Bach2g01554 1091 Pfam PPR repeat family 770 818 IPR002885 -
Bach2g01554 1091 Pfam PPR repeat family 839 888 IPR002885 -
Bach2g01554 1091 Pfam PPR repeat family 289 337 IPR002885 -
Bach2g01554 1091 Pfam PPR repeat family 359 407 IPR002885 -
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 805 839 IPR002885 -
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 183 218 IPR002885 -
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 875 909 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 772 799 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 496 526 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 807 841 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 291 324 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 362 394 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 326 360 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 878 910 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 396 416 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 843 875 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 531 563 IPR002885 -
Bach2g01554 1091 NCBIfam pentatricopeptide repeat 221 254 IPR002885 -
Bach2g01554 1091 Gene3D Tetratricopeptide repeat domain 176 248 IPR011990 GO:0005515
Bach2g01554 1091 Gene3D Tetratricopeptide repeat domain 249 353 IPR011990 GO:0005515
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 324 358 IPR002885 -
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 289 323 IPR002885 -
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 359 393 IPR002885 -
Bach2g01554 1091 PANTHER ATPASE EXPRESSION PROTEIN 3 423 523 - -
Bach2g01554 1091 Gene3D Tetratricopeptide repeat domain 442 528 IPR011990 GO:0005515
Bach2g01554 1091 Gene3D Tetratricopeptide repeat domain 529 607 IPR011990 GO:0005515
Bach2g01554 1091 Gene3D Tetratricopeptide repeat domain 354 441 IPR011990 GO:0005515
Bach2g01554 1091 Gene3D Tetratricopeptide repeat domain 680 819 IPR011990 GO:0005515
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 219 253 IPR002885 -
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 770 804 IPR002885 -
Bach2g01554 1091 Pfam PPR repeat 148 176 IPR002885 -
Bach2g01554 1091 Pfam PPR repeat 917 939 IPR002885 -
Bach2g01554 1091 Pfam PPR repeat 531 560 IPR002885 -
Bach2g01554 1091 Pfam PPR repeat 739 767 IPR002885 -
Bach2g01554 1091 Pfam PPR repeat 493 519 IPR002885 -
Bach2g01554 1091 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 735 769 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01554 Bach-Chr2 24412769 24416044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01554 707 981 Glycosyltransferase AT1G05670 31.317 4.87e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01554 - K17964 gmx:100783405 1443.71