Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01333 GCGATTCTCACTCTCTTCTAACTTGCTATGGCTTTAATCTCTCTCTCATTTTCTTCTTCGATTATTCCCACTCCAATCTCTCAGGAAAAATGCAAGATTTACTGCACCCCAATCCAGAGAACCCAAGATTCAGTTTCTCGAGTTATTCGCTGCGCAATTGCTGCAGCTCCAGGGACAAAAACTTCTTCTGCTAAAAGGAGACACTGGAAAGAAGGTGAATACCCTGGTATTTCCGAAACTTCGTTACCTGGGAGTACGAGGAAGGCACCCATTAAGAATGTGAAGAAGAAGTTGGAACGCAAGGCCACGGCCAAAGCCTGGGCCAACACTGTCACGGAAGCCCTATCCGATCGTATCGAGAAGAAGCAGTGGCTTCAAGCCCTTGAGGTATTTGACATGCTTAGAGAACAACCCTTTTACCAACCCAAAGAAGGGACTTACATGAAGCTCATTGTATTGCTTGGAAAATGTGGTCAACCCCATCGTGCCCATCAGCTTTTTGAGACAATGATTGAAGAAGATTGTGATCCTACTCCTGAGCTTTACACTGCCTTACTTGCAGCATATTGTCGGAACAATCTCATTGATGAAGCATTTTTAATTCTTACTAAGATGAAGGACATCCCTCTTTGCCAACCTGATGTTTTTACTTACAGTACCTTAATAAAAGCTTGTGTTGATGCCTTGAAGTTTGATTTAGTTGAGTTATTGTATGAAGAGATGGCTGAAAGATCTATCACGCCAAACACAGTCACTCAAAACATTGTCTTAAGCGGATATGGGAAGGCCGGCAAGTTTGATCAGATGGAGAAAGTGCTGTCAAGTATGCTGGAGAGCACCACATGCAAGCCTGATGTCTGGACCATGAACACAATCATCAGTGTCTTTGGTAATAAGGGTCAGATTGATATGATGGAGAGATGGTATGAAAAGTTCCGTAACTTTGGGATTGAACCGGAAACACGCACTTTTAATATCTTGATTGGTGCTTATGGAAAGAAAAGAATGTATGACAAAATGTCATCTGTGATGGAGTATATGCGCAAGTGTCAGTTTCCTTGGACAACATCAACTTTTAACAATGTGATCGAAGCATTTGCATCTGCAGGGGATGCTAAAAATATGGAATACACATTTGATCAGATGCGTGCTGAGCGAATGAAAGCAGACACTAAGACTTTCTGCTGCCTTATCAATGGTTACGCCAATGCAAGTCTCTTCCATAAAGTAATTAGCAGTGTTCGCTTGGCTGGGAAGTTGGAGATACCTGAGAATACCTCGTTTTATAATGCAGTCATCAATGCATGTGCAAAGGCAGAAGATTTGATGGAGATGGAGAGAGTTTTCATACGTATGAAAGATAATCATTGCCAACCAGATGACACAACATACTCTATCATGGTTGAAGCTTACAGAAAGGAAGGTATGAATGACAAGATTTATGATTTGGAGCAGGAAAAACAGAGGATGATATCTGATGATCAAAAGAATGACTAA 1497 0.4155 MALISLSFSSSIIPTPISQEKCKIYCTPIQRTQDSVSRVIRCAIAAAPGTKTSSAKRRHWKEGEYPGISETSLPGSTRKAPIKNVKKKLERKATAKAWANTVTEALSDRIEKKQWLQALEVFDMLREQPFYQPKEGTYMKLIVLLGKCGQPHRAHQLFETMIEEDCDPTPELYTALLAAYCRNNLIDEAFLILTKMKDIPLCQPDVFTYSTLIKACVDALKFDLVELLYEEMAERSITPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTTCKPDVWTMNTIISVFGNKGQIDMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKCQFPWTTSTFNNVIEAFASAGDAKNMEYTFDQMRAERMKADTKTFCCLINGYANASLFHKVISSVRLAGKLEIPENTSFYNAVINACAKAEDLMEMERVFIRMKDNHCQPDDTTYSIMVEAYRKEGMNDKIYDLEQEKQRMISDDQKND 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01333 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 346 380 IPR002885 -
Bach2g01333 489 PANTHER EXPRESSED PROTEIN 31 478 IPR044179 GO:0003729
Bach2g01333 489 Pfam PPR repeat 245 270 IPR002885 -
Bach2g01333 489 Pfam PPR repeat 137 166 IPR002885 -
Bach2g01333 489 Pfam PPR repeat family 173 217 IPR002885 -
Bach2g01333 489 Pfam PPR repeat family 416 462 IPR002885 -
Bach2g01333 489 Pfam PPR repeat family 275 322 IPR002885 -
Bach2g01333 489 Gene3D Tetratricopeptide repeat domain 201 268 IPR011990 GO:0005515
Bach2g01333 489 Gene3D Tetratricopeptide repeat domain 269 344 IPR011990 GO:0005515
Bach2g01333 489 Gene3D Tetratricopeptide repeat domain 71 200 IPR011990 GO:0005515
Bach2g01333 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 134 168 IPR002885 -
Bach2g01333 489 Pfam Pentatricopeptide repeat domain 348 393 IPR002885 -
Bach2g01333 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 311 345 IPR002885 -
Bach2g01333 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 240 275 IPR002885 -
Bach2g01333 489 Gene3D Tetratricopeptide repeat domain 345 488 IPR011990 GO:0005515
Bach2g01333 489 NCBIfam pentatricopeptide repeat 172 197 IPR002885 -
Bach2g01333 489 NCBIfam pentatricopeptide repeat 349 381 IPR002885 -
Bach2g01333 489 NCBIfam pentatricopeptide repeat 137 169 IPR002885 -
Bach2g01333 489 NCBIfam pentatricopeptide repeat 279 310 IPR002885 -
Bach2g01333 489 NCBIfam pentatricopeptide repeat 242 277 IPR002885 -
Bach2g01333 489 NCBIfam pentatricopeptide repeat 314 344 IPR002885 -
Bach2g01333 489 NCBIfam pentatricopeptide repeat 420 451 IPR002885 -
Bach2g01333 489 NCBIfam pentatricopeptide repeat 207 241 IPR002885 -
Bach2g01333 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 205 239 IPR002885 -
Bach2g01333 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 416 450 IPR002885 -
Bach2g01333 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 276 310 IPR002885 -
Bach2g01333 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 169 203 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01333 Bach-Chr2 22759758 22761942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g01333 136 467 Glycosyltransferase AT1G05670 22.388 7.92e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01333 - - qsa:O6P43_003738 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g01333 2 22759758 22761942 Bach2g01333 2 22759758 22761942 ECH