LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach2g01260	ATGATGTTCAGTAATAATATTTTGTACCCTAACGAGGACAAGGAGCCGAAGATTCTTCTGTATGCTTGCCGCAACTGCGATCACCAGGAAGTTGCTGATAACAACTGTGTCTATAGAAATGAAATACATCATTCTGTTGGGGAGCGCACTCAGGTGTTGCAGGATGTAGCTGCAGATCCAACTCTTCCTCGTACTAAGTCTGTCCGTTGTACACAATGCAACCATGGAGAAGCTGTTATTTTCCAGGCGACATCCAGAGGGGAAGAATGTATGACGCTATTTTTTGTTTGCTGCAACCCAAACTGTGGCCACCGATTCACATGCACGAATTTGAAGGCTCTATGTTAG	348	0.4454	MMFSNNILYPNEDKEPKILLYACRNCDHQEVADNNCVYRNEIHHSVGERTQVLQDVAADPTLPRTKSVRCTQCNHGEAVIFQATSRGEECMTLFFVCCNPNCGHRFTCTNLKALC	115

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach2g01260	115	CDD	Zn-ribbon_RPB9	58	107	IPR034012	GO:0006379
	Bach2g01260	115	Pfam	Transcription factor S-II (TFIIS)	69	107	IPR001222	GO:0003676\|GO:0006351\|GO:0008270
	Bach2g01260	115	FunFam	DNA-directed RNA polymerase subunit	41	108	-	-
	Bach2g01260	115	SUPERFAMILY	Zinc beta-ribbon	4	42	-	-
	Bach2g01260	115	SUPERFAMILY	Zinc beta-ribbon	45	107	-	-
	Bach2g01260	115	SMART	Cys4_2	68	108	IPR001222	GO:0003676\|GO:0006351\|GO:0008270
	Bach2g01260	115	ProSiteProfiles	Zinc finger TFIIS-type profile.	66	107	IPR001222	GO:0003676\|GO:0006351\|GO:0008270
	Bach2g01260	115	SMART	rpol9cneu	5	52	IPR001529	GO:0006351
	Bach2g01260	115	Gene3D	-	41	107	-	-
	Bach2g01260	115	Gene3D	-	2	40	-	-
	Bach2g01260	115	PANTHER	DNA-DIRECTED RNA POLYMERASE	5	107	IPR012164	GO:0003899\|GO:0006351

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach2g01260	Bach-Chr2	22049837	22052283	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach2g01260	K03017		-	nnu:104605091	209.92

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach5g01075	5	7621830	7624807	Bach2g01260	2	22049837	22052283	BWGD
	Bach2g01260	2	22049837	22052283	Bach2g01260	2	22049837	22052283	ECH