Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g00025 ATGAAGGGTGGAACAATTCAGATAAATTGGCACGAAACTAAATCAGTCCTAACCCTCGATTTCCACCCACTCTCCGGTACTCTCGCTACCGGCGGCGCCGACTTCGACATCAAGCTTTGGTCAGTAAAACTAGCAGAACCACAGAAGAAGCTACCCACAGTTTCCTATCTGAATAGCCTGTCTTACCATAGTTCTGCAGTGAATGTTATTCGCTTCTCTTCTTCAGGGGAACTACTGGCCTCTGGTGCTGATGGAGGGGACTTGATAGTATGGAAGTTACATCCTACAGATACTGGTCATACATGGAAAGTCCTCAAGATGTTAAGATCTCATCACAAGGACATTCTGGATCTGCAATGGTCTACCAATGCTGAATTTCTCATTTCCGGGTCAGTTGATAATTGTTGCATTATATGGGATGTCAATAAAGGGATTAACCTTCAGACTTTGGATGCCCATGCCCATTACGTTCAAGGGGTGGCATGGGACCCGTTGGGAAAGTATGTTGCTTCTCTTAGTTCTGACAGGACTTGCCGAATTTACATTAAGAAGTGTCTAAAATCAAAAGGTGGCGAGAAAATCAATTATGTTTGTCAACACGTTGTTTCCAAGGCAGAGCAGCCACTAATAGATAATTCTAAGTCCTCAAAATATCATCTCTTCCATGATGAGACATTGCCATCTTTCTTTAGAAGATTAGCCTGGTCCCCCGATGGTTTATTTCTACTTGTGCCTGCAGGCTCATATAAAATTGGTTCTGCGTCTGAATCAGTAAATGCCGCATACATATTTTCTAGGAAAGATCTCTCTCGGCCTGCTATACAACTCCCTTGTGCAAACAAAGCTGTGGTTGCTGTCCGGTTCTGTCCTGTAATTTTTAGCCTTCGTGGAACGAAGTCAGCTGGATTATTTAAGCTCCCTTATCGCATCATCTTTGCTGTGGCTACTTTAAATTCATTGTACATTTATGACACTGAAATCGCTGCACCAATAGCTGTATTTGCTGGTCTTCACTATGCATCAATAACAGACATCACATGGTCTCCTGACGCCCACTATTTGGCATTGTCTTCTCAAGATGGTTTCTGCACTTTGGTAGAATTTGAAAATGATGAACTTGGGATACCTATCTCTTCATCAGAAGAAAAGAAAATCTCAGAGAAGGATAGTAAGAGCTCAGTCCAGATGGATATGGAGAGAGATGTTGACATGGTCATTACTGAAGCAACTGGGAATGTTGGTGCAGTTGTAGCGGATGGTACGAAATCTGACGCAGCAGAGAAGACCGATGACATGGTTATAGAAGCAGCAAGGAATGTTAGTACAGTTGATGGAGATAGATGGAAAACTAAAGTAGAAAGGAAGGCGGAGGAACAGTCATCAATTTCTGAAAGTATAAAATCTGAAGCAAAAGAGAAGGTAGATAAACAGCGGTCCAGTACAGATATCGAAAAATTTGAAGCAGAAAAGAATATGGAGAAACAGCCATCTAGTTCAGATAGATTAAAAACTGAGGCAGCAGAGAAGGCAGAGCAAGAGCCTTCGAGTTTAATAAAGAGTACGCCCACTTCAAATAAGCCAGCCAAGAAACGTATTACTCCTATGGCAATTGATCCATGA 1620 0.4216 MKGGTIQINWHETKSVLTLDFHPLSGTLATGGADFDIKLWSVKLAEPQKKLPTVSYLNSLSYHSSAVNVIRFSSSGELLASGADGGDLIVWKLHPTDTGHTWKVLKMLRSHHKDILDLQWSTNAEFLISGSVDNCCIIWDVNKGINLQTLDAHAHYVQGVAWDPLGKYVASLSSDRTCRIYIKKCLKSKGGEKINYVCQHVVSKAEQPLIDNSKSSKYHLFHDETLPSFFRRLAWSPDGLFLLVPAGSYKIGSASESVNAAYIFSRKDLSRPAIQLPCANKAVVAVRFCPVIFSLRGTKSAGLFKLPYRIIFAVATLNSLYIYDTEIAAPIAVFAGLHYASITDITWSPDAHYLALSSQDGFCTLVEFENDELGIPISSSEEKKISEKDSKSSVQMDMERDVDMVITEATGNVGAVVADGTKSDAAEKTDDMVIEAARNVSTVDGDRWKTKVERKAEEQSSISESIKSEAKEKVDKQRSSTDIEKFEAEKNMEKQPSSSDRLKTEAAEKAEQEPSSLIKSTPTSNKPAKKRITPMAIDP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g00025 539 ProSiteProfiles Trp-Asp (WD) repeats profile. 16 50 IPR001680 GO:0005515
Bach2g00025 539 Gene3D - 249 416 IPR015943 GO:0005515
Bach2g00025 539 ProSiteProfiles Trp-Asp (WD) repeats profile. 60 101 IPR001680 GO:0005515
Bach2g00025 539 PANTHER CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B 1 539 IPR045145 GO:0006335
Bach2g00025 539 Gene3D - 4 248 IPR015943 GO:0005515
Bach2g00025 539 MobiDBLite consensus disorder prediction 514 528 - -
Bach2g00025 539 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 108 144 - -
Bach2g00025 539 MobiDBLite consensus disorder prediction 449 512 - -
Bach2g00025 539 MobiDBLite consensus disorder prediction 449 539 - -
Bach2g00025 539 FunFam Chromatin assembly factor 1 subunit FAS2 4 250 - -
Bach2g00025 539 SUPERFAMILY WD40 repeat-like 13 373 IPR036322 GO:0005515
Bach2g00025 539 ProSitePatterns Trp-Asp (WD) repeats signature. 127 141 IPR019775 -
Bach2g00025 539 ProSiteProfiles Trp-Asp (WD) repeats profile. 150 181 IPR001680 GO:0005515
Bach2g00025 539 SMART WD40_4 3 41 IPR001680 GO:0005515
Bach2g00025 539 SMART WD40_4 101 140 IPR001680 GO:0005515
Bach2g00025 539 SMART WD40_4 143 182 IPR001680 GO:0005515
Bach2g00025 539 SMART WD40_4 53 92 IPR001680 GO:0005515
Bach2g00025 539 SMART WD40_4 327 367 IPR001680 GO:0005515
Bach2g00025 539 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 60 93 - -
Bach2g00025 539 ProSiteProfiles Trp-Asp (WD) repeats profile. 108 149 IPR001680 GO:0005515
Bach2g00025 539 Pfam WD domain, G-beta repeat 146 181 IPR001680 GO:0005515
Bach2g00025 539 Pfam WD domain, G-beta repeat 58 92 IPR001680 GO:0005515
Bach2g00025 539 Pfam WD domain, G-beta repeat 103 140 IPR001680 GO:0005515
Bach2g00025 539 Pfam WD domain, G-beta repeat 11 41 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g00025 Bach-Chr2 363514 368439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g00025 25 181 Miscellaneous Gene Families AT5G08390 28.662 2.64e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g00025 K10751 - gmx:100784411 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach2g00025 2 363514 368439 Bach2g00025 2 363514 368439 ECH