LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g02998	ATGGCTTCCACAAGTGTGCCAAGCTCGTCCATCGTGGCTTTCTTCATTGTGCTCCTCTTGGCTATCACCGGCGAGGCACGTGACCCATTTGCCTGTGACCCCAAGGATGGAAACACCAAGAACTTCCCCTTCTGCCGTGTTTCGCTTCCGATAGCGGAGAGAGTGAAGGACCTGATTGGGAGATTAACGCTGCAAGAGAAGGTTAGCTTGCTGGTGGACAATGCAGCGCCGGTTCCTCGCGTCGGGATCAAAGCCTATGAATGGTGGTCTGAAGCGCTTCATGGGGTTTCCAATGTGGGCCCTGGAACTAAGTTTGCTGGCTCATTCCCTGCCGCCACTAGCTTCCCTCAGGTCATCACCACCGCTGCTTCTTTCAATGCATCCTTGTGGGAGGCAATCGGACGGGCTGTGTCAGACGAAGCAAGAGCAATGTACAACGGAGGAACGGCTGGGCTCACGTATTGGAGCCCAAATGTGAACATTTTCAGGGACCCAAGGTGGGGACGTGGGCAGGAAACTCCCGGTGAAGATCCCGTCTTAGCGGGTAGATATGCTGCGAATTATGTGAAGGGACTACAGGGAACGGACGGTAACCGGTTGAAGGTGGCCGCTTGTTGCAAGCACTTTACGGCTTACGACCTGGACAATTGGAACGGGGTTGATCGGTTTCACTTCAATGCACAGGTTAGTAAGCAGGACATAGAGGATACGTTCGATGTGCCATTCAGGATGTGTGTGAAGGAAGGCAAAGTGGCGAGCGTCATGTGTTCTTACAATCAAGTAAATGGTGTCCCTACTTGTGCGGACCCCAAACTCCTAAAGAAAACGGTGCGTGGTCAATGGGATCTTGATGGGTACATTGTATCAGACTGTGATTCTGTTGGGGTGTTCTACAGCAGCCAACATTATACATCAACGCCAGAAGAGGCAGCTGCCGATGCCATTAAAGCAGGTTTGGATTTGGACTGTGGGCCTTTCCTGGGATTGCACACACAGGATGCAGTTAAAAGAGGGTTGCTAACCGAAGCTGATGTTAATGGTGCATTGGTGAATACGCTGAGTGTGCAAATGAGATTAGGGATGTTCGATGGGTCTGACCCTTATGGCAATCTGGGACCAAGAGACGTGTGCAGCCCTGCTCACCAAGAGCTGGCCCTTGAAGCTGCCAGTCAAGGAATTGTACTCCTTAAGAACACGGGACCTTCTTTGCCCCTCTCCCCACGCCGTCACCGTAATGTTGCTGTTATTGGGCCCAATTCTAACGTCACCGTTAGCATGATCGGCAACTATGCTGGTGTTGCTTGTGGATACACCAGTCCTCTACAAGGAATAGGGAAATACGTTAAGATACTTCACCAACTTGGATGTGCGGATGTGGCTTGCAAGGATGACAAACAATTCCAAGCAGCTGTTGATGCAGCCCGTCAAGCAGATGCAACGGTTCTGTTAATGGGCCTGGACCAGTCCATTGAGGCTGAAACCGTGGATAGGGCTGGTCTCCTTCTTCCTGGGCGTCAGCAAGACCTTGTGTCCAAGGTGGCGGCTGCCTCCAAGGGACCCACCATATTGATCTTGATGTCCGGTGGGCCTATCGACGTAACCTTTGCAAAGAATGACCCACGTATCGAGGGTATCTTATGGGCTGGTTATCCGGGCCAAGCCGGTGGTGCCGCCATCGCAGACATCTTGTTCGGAGCCGCCAACCCAGGGGGCAAGCTCCCAATGACATGGTACCCACAAGAGTACCTTACTAACTTGCCAATGACAAACATGGCAATGAGACCAAGCCGATCCACAGGGTACCCTGGAAGAACGTATAGATTTTACAAGGGTCCAGTGGTGTACCCATTTGGGCACGGATTAAGTTATACTCACTTCGTTCATACATTAGCAAGTGCGCCAACAGTGGTGTCCGTGCCCTTGGATGGCCACCGCAAAGGCAATAGCAGCAACAATATTTCAAATAAGGCAATTAGAGTGACACATGCCAGATGTGAGAAGCTATCCATGAGCCTCCACGTGGACGTTAAAAATGTGGGGTCCAAGGACGGCACTCACACATTGTTGGTGTTCTCGGCACCGCCTGCCGGCGGCGGTCATTGGGCACCGCACAAGCAACTGGCAGCATTTGAGAAAGTGCACGTCCCTGCAAAGTCTCAGCAGCGAGTCCAAGTCAATATTCATGTGTGCAAGTTCCTTAGTGTTGTGGACAAATCTGGAATCCGAAGAATTCCAATGGGACAACACAGTATTCACATTGGAGATGTGAAGCACTCCGTATCACTTCAAGCACAAACACTAGGGATTATCAAATCTTAA	2319	0.5132	MASTSVPSSSIVAFFIVLLLAITGEARDPFACDPKDGNTKNFPFCRVSLPIAERVKDLIGRLTLQEKVSLLVDNAAPVPRVGIKAYEWWSEALHGVSNVGPGTKFAGSFPAATSFPQVITTAASFNASLWEAIGRAVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGRYAANYVKGLQGTDGNRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPKLLKKTVRGQWDLDGYIVSDCDSVGVFYSSQHYTSTPEEAAADAIKAGLDLDCGPFLGLHTQDAVKRGLLTEADVNGALVNTLSVQMRLGMFDGSDPYGNLGPRDVCSPAHQELALEAASQGIVLLKNTGPSLPLSPRRHRNVAVIGPNSNVTVSMIGNYAGVACGYTSPLQGIGKYVKILHQLGCADVACKDDKQFQAAVDAARQADATVLLMGLDQSIEAETVDRAGLLLPGRQQDLVSKVAAASKGPTILILMSGGPIDVTFAKNDPRIEGILWAGYPGQAGGAAIADILFGAANPGGKLPMTWYPQEYLTNLPMTNMAMRPSRSTGYPGRTYRFYKGPVVYPFGHGLSYTHFVHTLASAPTVVSVPLDGHRKGNSSNNISNKAIRVTHARCEKLSMSLHVDVKNVGSKDGTHTLLVFSAPPAGGGHWAPHKQLAAFEKVHVPAKSQQRVQVNIHVCKFLSVVDKSGIRRIPMGQHSIHIGDVKHSVSLQAQTLGIIKS	772

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g02998	772	Pfam	Fibronectin type III-like domain	688	755	IPR026891	-
	Bach1g02998	772	Gene3D	-	54	368	IPR036962	GO:0004553\|GO:0005975
	Bach1g02998	772	PANTHER	SUGAR HYDROLASE-RELATED	21	760	IPR044993	GO:0009044\|GO:0045493
	Bach1g02998	772	Gene3D	-	379	624	IPR036881	GO:0004553\|GO:0005975
	Bach1g02998	772	FunFam	Probable beta-D-xylosidase 2	649	769	-	-
	Bach1g02998	772	Pfam	Glycosyl hydrolase family 3 N terminal domain	109	350	IPR001764	GO:0004553\|GO:0005975
	Bach1g02998	772	SUPERFAMILY	(Trans)glycosidases	42	392	IPR017853	-
	Bach1g02998	772	SMART	Fn3_like_2	686	757	IPR026891	-
	Bach1g02998	772	Pfam	Glycosyl hydrolase family 3 C-terminal domain	393	623	IPR002772	GO:0004553\|GO:0005975
	Bach1g02998	772	SUPERFAMILY	Beta-D-glucan exohydrolase, C-terminal domain	393	626	IPR036881	GO:0004553\|GO:0005975
	Bach1g02998	772	Gene3D	Immunoglobulins	648	770	IPR013783	-
	Bach1g02998	772	PRINTS	Glycosyl hydrolase family 3 signature	202	218	IPR001764	GO:0004553\|GO:0005975
	Bach1g02998	772	PRINTS	Glycosyl hydrolase family 3 signature	115	134	IPR001764	GO:0004553\|GO:0005975
	Bach1g02998	772	PRINTS	Glycosyl hydrolase family 3 signature	276	294	IPR001764	GO:0004553\|GO:0005975
	Bach1g02998	772	FunFam	probable beta-D-xylosidase 7	54	368	-	-
	Bach1g02998	772	FunFam	probable beta-D-xylosidase 2	378	624	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g02998	Bach-Chr1	39962678	39966118	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g02998	10	772	Glycoside Hydrolase	AT1G02640	73.629	0.0	1196

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g02998	-		-	gmx:100798630	1331.24

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach8g00370	8	2428835	2433304	Bach1g02998	1	39962678	39966118	BWGD
	Bach1g02998	1	39962678	39966118	Bach1g02998	1	39962678	39966118	ECH