Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02860 ATGGGTAAGGTTCTCCGAGAAACGGCAAAGCCATCATCTAATTCTTCACATCCCTCCCCTTCTTCTTCCCCTGCTACAACATCATCGACATCGATCACCGAGACTGTTAGGGGTTCTCACCAGTTCAAGATCACGGGCTATTCCTTATCAAAAGGAATTGGGATTGGGAAATACATAGCATCTGATACGTTTTCGGTCGGTGGGTATGATTGGGCGATCTACTTTTACCCCGACGGGAAGAGTGTCGAGGACAATGCTACATACGTATCTCTATTTATCGCGCTTGCCAGTGAGGGGACAGACGTTAGGGCGCTTTTTGAGTTGACCCTTTTGGACCAGAGCGGGAAGGAGAGGCATAAGATACATAGTCATTTCGAGAGAACGCTCGAAAGTGGGCCGTACACCTTAAAATATCGCGGTAGCATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGCTCTGGAGACATCAGATTATCTTAAAGATGATTGCCTTTCTGTTAACTGTAGTGTTGGTGTTGTGAGGTCGCGGTCGGAGGGCCCTAAAATATACTCCATAACAATACCACCTTCTAACATAGGACAGCAATTTGGGAAGCTATTGGAGAGTGGAAAAGGAAGTGATGTGACTTTTGAAGTTAATGGAGAAACTTTTGCTGCTCATAAATTGATATTGGCAGCGCGATCACCTGTGTTCAGAGCCCAACTTTTTGGTCCCATGAAAGATCATAACACCCAGTGTATAAAAGTTGAAGACATGGAAGCGCCAGTTTTTAAGGCATTGCTTCATTTTATATATTGGGACTCGCTGCCTGATATGCAAGAGCTTACTGGTTTGAACTCAAAATGGGCAACTACGTTGATGGCTCAGCATCTGCTAGCAGCAGCAGATCGGTATGGCTTAGAGAGGCTCAGGTTGATGTGTGAAGCCGATCTTTGTGTAGATGTTGCTATAAACACTGTGGCTACAACGTTAGCTTTGGCTGAGCAACACCATTGTTTCCAGCTGAAATCAGTCTGTCTCAAATTCATTGCAACGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTTGAGTACTTGAAGGAAAGCTGCCCGTCTGTTCTGACTGAGCTATTGGAGTACGTGGCTAGATTTACTGAGCATTCAGTCTTCATGTGCAAGCATGGGAACGAAGCTATTCTTGATGGCAGTGACATAAATGGTAGGCGGAAATTCAGAAGGGTCAGCCGAGATGGAGAGCAAGCACTAAAGGTGGAAAGCAGTAGAGGAAGAGGAAGAGGAGCACACAGGGGTAGAGGACGTGGAAGAGAGAAGCAATCTTTCACAAAGGCAACAGTGGAGTGCTACAAGTGTCACAATTTGGGACATTTTCAATATGAATGTCCCAAATGGAACAAAGAGACCAATTATGCAGAATTAGATGAAGAAGAAGATTTCCTTCTGATGGCTTTCGTAAAAGGGAATGAGGCAAAGAGGAGTGATGCATGGTTCTTGGACTCGGGGTGTTCTAATTACATGTGTGGAAACAGAAGCATGTTTTTAAACATGGTAGAAGGATGCAAGCAATCTGTTAAGTGTGGAAACAATTCTCGGATGACTGTAGCTGGAAGAGGTAGTATTAAATTAATATTCAATGGCACCTCCTTTCTGATTCGAGATGTGTATTATGTTCCAGAACTTCGAAACAATCTATTGAGTATGGGGCAGCTGCAAGAAAAGGGCCATGCTATCCTCATAAAAAATGGGATATGCAATATTTATCATCCATACAAGGGCTTGATTGCACATACAAGCATGAGTGCCAACCGTATGTTCATCCTCTTCAATGAAAGCTCTATCAATTCTGCTCCCATTGAAGAATGTCTACATACTTCCTCTGATCTCACTCATTTATGGCATCAAAGGTATGGTCACATAAGCTACAAGGGTTTGAAGACTCTACAAACAAAGAAAATGGTGCGTGGACTGCCCCAATTGGAAATCTCTACTGTCATCTGTGCTGATTGCCTCACTGGCAAGCAACACCGTAGTTCAATTCCTAAGAAAAGTGAATGGCGAGCCAGCAAGGTGTTAGAACTCATACATGCAGATATCTGTGGACCAATAGAGCCAATCTCAAACAGTGGAAAGAGGTATCTCTTATGCTTCATTGATGACTACAGTCGTAAGGGTTGGGTCTACTTGCTCTCTGAAAAAACAGAAGCACTGGAGTGTTTCAAGAATTTCAAGAAACTAGTGGAAAAAGAAGTAGAAGCCTCCATCAAATGTTTACGAACGGACAGGAGAGGAGAGTTTAACTCTCACAATTTCAAATCATTTTGTGAAGCAGAAGGAATAAAGAGGCAACTTACCACAGCATACACACCACACCAAAACGGAGTAGCAGAACGCAAGAACAGAACAGTTATGAACATGGTGCGCTGCATGCTCTCTGCAAAAAAGGTTCCCAAACCTTTCTGGACTGAAGCTGCAAACTGGACATTTTACTTGCTGAATAGATGTCCAACACATGCTGTAAGGAACATCACTCCTCAAGAGGCTTGGAGTGGAGTCAAGCCTTCAGTGGAACATCTTCGAGTTTGGGGCTGTGTGGCTCATGTGCACATACCAGAGGCAAAACGAGGTAAACTAGATGACAAGAGCTTTCCTTGTATCTTATTAGGAGTAAGTGATGAATCAAAAGGTTATCGGCTGTTTGACCCTAAAACAAAGAAAATTGTAGTCAGTAAAGATGTAGTGTTTGAGGAAGAGAAAAGTTGGGATTGGGGTTCAAGTTATAAAGAACAAATAGAAGCAAAGTTGACTTGGGGTGAAGATGATTTCAGTAGTGATGAGAGTGAAGGGGATCACAAAGGTGAAGCTAATATTGGTGGGATGGAAGAAGACATGGATTTAGATAGTGGCAGTGAGAATGATGAGAATATTGTAAGGGGTAGTGGAGCTAGAAATGAAGTAGAAAGTTCACAAGAAATTGTGACTCAAGGGAGAGAGAGGAGGACACCAGCTTGGATGAAAGAGTTTGTGAGTGGTGAAGGTTTGAGTGAAGAAGAAGAAGCAGAGGCCTACATGTTGTTCTTCTCGTACTTCAAGGATTTGGTGGGGAGAGAAGTAACAGTGGAGCTCAAGAACGATTTGGCGATTAGAGGGACGTTGCACTCAGTTGATCAGTACCTTAATATCAAGCTAGAGAATACTCGCGTTGTTGATGAAGACAAGTACCCCCATATGCTCTCAGTAAGGAACTGCTTCATCAGAGGATCAGTGGTGAGATATGTGCAATTACCTCCAGAAGGGGTGGACATTGAACTATTGCATGATGCCACAAGGAGAGAAGCTCGGGGTGGTTAA 3354 0.4338 MGKVLRETAKPSSNSSHPSPSSSPATTSSTSITETVRGSHQFKITGYSLSKGIGIGKYIASDTFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKIHSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDYLKDDCLSVNCSVGVVRSRSEGPKIYSITIPPSNIGQQFGKLLESGKGSDVTFEVNGETFAAHKLILAARSPVFRAQLFGPMKDHNTQCIKVEDMEAPVFKALLHFIYWDSLPDMQELTGLNSKWATTLMAQHLLAAADRYGLERLRLMCEADLCVDVAINTVATTLALAEQHHCFQLKSVCLKFIATPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSVFMCKHGNEAILDGSDINGRRKFRRVSRDGEQALKVESSRGRGRGAHRGRGRGREKQSFTKATVECYKCHNLGHFQYECPKWNKETNYAELDEEEDFLLMAFVKGNEAKRSDAWFLDSGCSNYMCGNRSMFLNMVEGCKQSVKCGNNSRMTVAGRGSIKLIFNGTSFLIRDVYYVPELRNNLLSMGQLQEKGHAILIKNGICNIYHPYKGLIAHTSMSANRMFILFNESSINSAPIEECLHTSSDLTHLWHQRYGHISYKGLKTLQTKKMVRGLPQLEISTVICADCLTGKQHRSSIPKKSEWRASKVLELIHADICGPIEPISNSGKRYLLCFIDDYSRKGWVYLLSEKTEALECFKNFKKLVEKEVEASIKCLRTDRRGEFNSHNFKSFCEAEGIKRQLTTAYTPHQNGVAERKNRTVMNMVRCMLSAKKVPKPFWTEAANWTFYLLNRCPTHAVRNITPQEAWSGVKPSVEHLRVWGCVAHVHIPEAKRGKLDDKSFPCILLGVSDESKGYRLFDPKTKKIVVSKDVVFEEEKSWDWGSSYKEQIEAKLTWGEDDFSSDESEGDHKGEANIGGMEEDMDLDSGSENDENIVRGSGARNEVESSQEIVTQGRERRTPAWMKEFVSGEGLSEEEEAEAYMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDEDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02860 1117 ProSiteProfiles Zinc finger CCHC-type profile. 450 465 IPR001878 GO:0003676|GO:0008270
Bach1g02860 1117 MobiDBLite consensus disorder prediction 413 428 - -
Bach1g02860 1117 FunFam U6 snRNA-associated Sm-like protein LSm2 1025 1117 - -
Bach1g02860 1117 ProSiteProfiles Integrase catalytic domain profile. 678 854 IPR001584 GO:0015074
Bach1g02860 1117 SUPERFAMILY POZ domain 184 313 IPR011333 -
Bach1g02860 1117 MobiDBLite consensus disorder prediction 1 34 - -
Bach1g02860 1117 MobiDBLite consensus disorder prediction 941 960 - -
Bach1g02860 1117 SUPERFAMILY Retrovirus zinc finger-like domains 433 470 IPR036875 GO:0003676|GO:0008270
Bach1g02860 1117 CDD MATH 38 171 IPR002083 GO:0005515
Bach1g02860 1117 SMART BTB_4 207 316 IPR000210 GO:0005515
Bach1g02860 1117 MobiDBLite consensus disorder prediction 413 439 - -
Bach1g02860 1117 Gene3D - 316 389 - -
Bach1g02860 1117 CDD BTB_POZ_BPM_plant 193 313 - -
Bach1g02860 1117 Pfam Integrase core domain 691 791 IPR001584 GO:0015074
Bach1g02860 1117 CDD BACK_AtBPM-like 313 376 IPR034090 -
Bach1g02860 1117 SUPERFAMILY TRAF domain-like 34 173 - -
Bach1g02860 1117 FunFam BTB-POZ and math domain 1 183 310 - -
Bach1g02860 1117 Gene3D - 1018 1116 - -
Bach1g02860 1117 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 26 374 IPR045005 GO:0016567
Bach1g02860 1117 SUPERFAMILY Sm-like ribonucleoproteins 1027 1115 IPR010920 -
Bach1g02860 1117 Gene3D - 684 864 IPR036397 GO:0003676
Bach1g02860 1117 ProSiteProfiles BTB domain profile. 207 266 IPR000210 GO:0005515
Bach1g02860 1117 Pfam LSM domain 1031 1095 IPR001163 -
Bach1g02860 1117 MobiDBLite consensus disorder prediction 941 972 - -
Bach1g02860 1117 SMART Sm3 1029 1096 IPR001163 -
Bach1g02860 1117 Pfam GAG-pre-integrase domain 612 676 IPR025724 -
Bach1g02860 1117 SUPERFAMILY Ribonuclease H-like 687 854 IPR012337 -
Bach1g02860 1117 Gene3D Potassium Channel Kv1.1; Chain A 183 310 IPR011333 -
Bach1g02860 1117 CDD LSm2 1026 1114 IPR016654 GO:0006397
Bach1g02860 1117 ProSiteProfiles Sm domain profile. 1026 1100 IPR047575 GO:0003723
Bach1g02860 1117 SMART math_3 42 154 IPR002083 GO:0005515
Bach1g02860 1117 Pfam BTB/POZ domain 198 313 IPR000210 GO:0005515
Bach1g02860 1117 ProSiteProfiles MATH/TRAF domain profile. 37 171 IPR002083 GO:0005515
Bach1g02860 1117 Pfam MATH domain 56 171 IPR002083 GO:0005515
Bach1g02860 1117 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 36 175 IPR008974 GO:0005515
Bach1g02860 1117 MobiDBLite consensus disorder prediction 8 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02860 Bach-Chr1 39010938 39022865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02860 K10523 - qsa:O6P43_010666 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00507 8 3227039 3228966 Bach1g02860 1 39010938 39022865 BWGD
Bach1g02860 1 39010938 39022865 Bach1g02860 1 39010938 39022865 ECH