Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02509 ATACACTTCGCAGTGTATATACTGTGAAATACTAGCGTAATGTGATAGTATAACAATAATTTCATCAAATGGAGACCGGAAGGAGTTTATTTTGTTCATCTGCACCGCTTCCTCCAAGAACCCACCACAGGAGCGGTCTTCCTTCACCGTCTTCGCCTTCTTCTACTTCAGTATTGATGTTTCATGAACAAGCTGCTCCTTCAATTACCCTTAAATCTCCTAGTTTGCTGGGTCGGAATCTGCCTACCTCGTGTTTTTTACAAGAGCAGGGTGATGAGTATAAGACTCTAATGCACATGTACAAGGAGGATAAGACATCCCAGGCTACATTAAATACAAGACAGATGGATATGGCCTCAATTGATGAAGAAAATAGCCCTGGTGATGCTGATCATTTGGTGCATGACTTTAGGCAACAGTTCCATCTCTGGCCTCATTTACAGAACTTATTGACTTCTTTAGAGACTGAGGAAATTGCAGCATCTTCAACTCTGCAGCCTGTTACCATTGACTCAGAGAATCTTGTTGATGTTGAGCAATGTAATGCTGTTGCTCTTGCTAAACAAGCTTTGTCCACCTCAAAACAAGCTGTATCAGTAGATGAAGACTTGAAATCAGCCAAAGCTGCTGCAGCTGCTGATGATGATGATTCACCCCCTTTGGTCCTGGCCTCAACAAGTTTGGCCGTCTCTACACTTGGAAAAAATAAAATTGTGAGGTCAACACGGCTTCAAGAGAGACGATCTAAGAAGAGAAAAGTACCAAAGTCAAAATTTCAAGACGACGAAAGTTATTTTACAAGAAAGGCAGATGACGAGGAAAGGCTACATGTAGAAAAGAAGACAAACAAAGGTTTTGATCAAAACGACTACTTGCGCTTTTTCTTGTGGGGTCCTGAAACAAAGCAACTATTGACTCTTGAAGAAGAGTCTCAATTGATTGCTCAACTACAGGATCTATTGAGATTGGAAAGAGTGAAGAGCAGGCTTCAATACCAATTTGGCAGGGAACCAACTTTGGCTGAATGGGCTGAGGGAGTGGGGCTTAGTCGTCGAGACCTGCAGTCACAGCTTCATTCTGGTAACACCAGCAGGGAAAGACTGATTAATGCAAATTTGCGCTTGGTTGTTCACATTGCAAAACATTATCAGGGGCGTGGCCTCAGTCTTCAGGATTTATTGCAGAAGGGAAGTATGGGTCTTATGAAGAGTGTAGAAAAGTTTAAACCCCAAGTTGGTTGCCGGTTTGGTATTTATGCATATTGGTGGATAAGGCAAACTATAAGGAAGGCCATATTTCAACATTCCAGGACAATCCGTCTGCCGAAGAATGTGTATACAGCTTTGGGCAAGGTAATGGAGGCAAAGAAATTGTACATTCAAGAAGGAAATCTTCACCCCACCAAAGATGAACTAGCTAGAAGGGCCGGAATCACAGTTGACAAGCTTGATAATTTGCTATTTGTTGCGCGAGTACCAGTTTCGATGCAGCAAACTGTGTGGGCAGACCAAGATACCACTTTCCAGGAGATTACTGCAGACTCCGCAATCGAGACCCCCGATTTGAGCGTTGCAAAACAACTGATGAGGCGACATGTGCGCAGCCTCCTGAGTGTCTTAAGCCCAAAAGAAAGGAGGATAATTAAGCTAAGATTTGGTATTGAGGATGGTAAACCAAAGTCATTATCAGGAATTGTAGATGTATTTGGTTTGTCCAAGGAACGGATCCGGCAGATAGAGATCCGAGCGTTATACAAGCTCAAGAAGTGCCTTGTCAGCCAACGACTTGATGCATATGCAGACCTTCTTGTATAGATGAGTTTTACAAACCAAAATTTTCTTGTTCATTTATCATGCCTGTGATTTTAACTGGTTAAGCCCAAAGTGCAAAAGATCAAGTTTTTCACAGAAATATGATACTAAGCGTTGGTAATTGAGGCTAAAAAAAATGAAGAGTGGAAAAAGGAACTAGTTTAAAATATGTAAAGAATTCGATGTTTTGTATATCACGTTTACTGTTTCATGGTTTTGTATTCTTTTGATTGAATTCGATATTCCTTTGCAGTGCTTAATAAAATTGCTGTGCAACTTATATACCTTATCCGATTCCCTCACCCTCACATACCCATATGCACCTTTGTGCTTCGCCACATCGTGCACTTCTGGTTTACTGTAAGAGGTCTGACTGTGAGATTAAGTGTTGCATATTGGTGGAAGTGATAGAATTCAATCAATTTGTGATATTTCAACCATCTGGTTTTGTACCATAGCCCTTGCCTATCTGCTTCAACGTTCG 2295 0.4139 METGRSLFCSSAPLPPRTHHRSGLPSPSSPSSTSVLMFHEQAAPSITLKSPSLLGRNLPTSCFLQEQGDEYKTLMHMYKEDKTSQATLNTRQMDMASIDEENSPGDADHLVHDFRQQFHLWPHLQNLLTSLETEEIAASSTLQPVTIDSENLVDVEQCNAVALAKQALSTSKQAVSVDEDLKSAKAAAAADDDDSPPLVLASTSLAVSTLGKNKIVRSTRLQERRSKKRKVPKSKFQDDESYFTRKADDEERLHVEKKTNKGFDQNDYLRFFLWGPETKQLLTLEEESQLIAQLQDLLRLERVKSRLQYQFGREPTLAEWAEGVGLSRRDLQSQLHSGNTSRERLINANLRLVVHIAKHYQGRGLSLQDLLQKGSMGLMKSVEKFKPQVGCRFGIYAYWWIRQTIRKAIFQHSRTIRLPKNVYTALGKVMEAKKLYIQEGNLHPTKDELARRAGITVDKLDNLLFVARVPVSMQQTVWADQDTTFQEITADSAIETPDLSVAKQLMRRHVRSLLSVLSPKERRIIKLRFGIEDGKPKSLSGIVDVFGLSKERIRQIEIRALYKLKKCLVSQRLDAYADLLV 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02509 581 Gene3D - 418 495 IPR036388 -
Bach1g02509 581 Pfam Sigma-70, region 4 513 566 IPR007630 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 PANTHER RNA POLYMERASE SIGMA FACTOR RPO 148 577 - -
Bach1g02509 581 ProSitePatterns Sigma-70 factors family signature 1. 369 382 IPR000943 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 NCBIfam sigma-70 family RNA polymerase sigma factor 342 568 IPR014284 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 PRINTS Major sigma-70 factor signature 369 382 IPR000943 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 PRINTS Major sigma-70 factor signature 517 529 IPR000943 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 PRINTS Major sigma-70 factor signature 553 564 IPR000943 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 PRINTS Major sigma-70 factor signature 393 401 IPR000943 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 PRINTS Major sigma-70 factor signature 538 553 IPR000943 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 SUPERFAMILY Sigma2 domain of RNA polymerase sigma factors 265 415 IPR013325 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 MobiDBLite consensus disorder prediction 1 33 - -
Bach1g02509 581 PIRSF Sigma_factor_SigC 1 581 IPR016262 -
Bach1g02509 581 Gene3D - 500 580 IPR036388 -
Bach1g02509 581 Pfam Sigma-70 region 3 426 499 IPR007624 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 418 491 IPR013324 -
Bach1g02509 581 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 478 576 IPR013324 -
Bach1g02509 581 Gene3D - 211 414 - -
Bach1g02509 581 Pfam Sigma-70 region 2 345 414 IPR007627 GO:0003700|GO:0006352|GO:0006355
Bach1g02509 581 CDD Sigma70_r4 507 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02509 Bach-Chr1 36381564 36386466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02509 - - qsa:O6P43_010271 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g02509 1 36381564 36386466 Bach8g00815 8 5361299 5361532 BWGD