Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01507 CCGCCATTGACGATAAATCTGAGTTTGCTGAACAATAGCTAGGTTCACGGCATAGATATTCCCCACTCCAGAAGATGTTGTTTGTCTAGAAAGAAGAAGGGAAAGCAAATATTTTCAAAAGATGAGGTCTTCTTCTGAGACAATCAACATCGCTGCCAGTGTGCAGAGACTTGATGTTGATCATAGGATTTCTCTTCGCTTCTATTATAGGATCGTTGATAATATCCTCAAACAGGCTGATATCTTTCGGGCAGAGAAGAATATTATAGATTTATATGTCATGCTTCTAAGATTTTCTAGTTTGGTGTCTGAGACAATACCATGCCATCGAGAATATAAAGCATCTTCACAAAGTAAGAAAGTATCTTTGAAAAAGAAATTGTTAAATTCCTTGAATGAACTGGAGGAGTTGAAACCATTGGTACAACTGAAGATCAATGAACTTAACAGCAGGCATGCATACCCGAAAAATGGATGGGCAAATTTTCATTCAAATAACTCAGTAGAATTTGCTCCAGTGAAAAAGCAAACTTTGACTAGTGTTAGTGAAATGAAGGCACTGAGACCAACTACTGTAAATAGCATTGCTTATCAAGGATCAAGGGGTCAGCAGTTTAATCATGCGAGGCCAGTGGAAGAGTATATCCAAAGACTATCTCTAACTCTCCCACGTCCAAGGGATGAAACTCTCTCAAGACATTCCATTCTTGGCCCCAATGGGCTTAAAGGGCAATGGCAGCTGCCTATAAGAGATAAAGGGGTTAGGTATCCAACCAACATAGATCTGTCTCCAGTTGAAATACCAAGAATGCAGCAATCCTTGGAAAATGGGTCTCTGGACAAAAATAATGATAGCATCTCAGGAAAAACTACATCAGATTTAGAATCAATTCTTATCCAGAGTGAGGATGGTCAGCCTAAATCAGTTCATACCCAGAGTGAAGATTGCTTGGCCCAGAATGCGAAGGAACCTGGTTCTCTTATTTCTTTTGAAACAACAGAAATCCCTGCTCACACTGATATCATCAGACAGCCTTCTCCCCCCCCTGTACTTGCTGAAGTACAAGATTTGGTCCCTGCAGTATCACCTCATGTTATGGAGGCAGAATGTAAAACAGAGACTCCATCTGATAGTTTTGTTAGTGGGGAGGCTCCTCTGCAACTTCACATTTCAACTTCTTTGATGGAGAGTTTTATGAAGCTTGCCAAGTCGAATACTAGCAAAAATTTAGAGACATGTGGTGTCCTTGCGGGTTCACTTAAAAACAGAAAGTTTTATATTACAGCTCTAATCATTCCAAAGCAGGAGTCAACATCTGATTCTTGCCAGACCACAAACGAAGAGGAAATATTTGAAGTGCAGGATAAACTATCTCTTTTTCCCCTTGGCTGGATTCATACACATCCTACACAATCTTGTTTCATGTCATCAATTGATCTGCATACCCATTACTCATATCAGATTATGCTGCCAGAAGCTGTTGCAATAGTCATGGCACCAAAAGACAGTTCAAGAAACCATGGCATTTTTCGGTTGACGACCCCAGGTGGCATGTCGGTGATTAGACAATGCGAGCAACGTGGCTTCCATCCACATAGTCAGCCTCCAGATGGTGGTCCCATTTACAAGACGTGTACAGATGTTTACATGAACCCAGATTTAAAATTTGATGTCATTGATCTTCGATGATTAGAGTTTGCTGTAATTTAGATGGATAACGACCTAGTAATCTGATTGTTGATATGCCATGCTTTCTATGATTTACAGGTTTTTCCATTAAATCAGCCATCATAATAATGCATGGATGGCTGTGCTTGTAAAAAGAAAAGATAATGTCCATTGGCTGTTTATTTTTGGCTTCTGCTTATTCTTATACGTTGTAACTTCTCA 1891 0.3982 MRSSSETINIAASVQRLDVDHRISLRFYYRIVDNILKQADIFRAEKNIIDLYVMLLRFSSLVSETIPCHREYKASSQSKKVSLKKKLLNSLNELEELKPLVQLKINELNSRHAYPKNGWANFHSNNSVEFAPVKKQTLTSVSEMKALRPTTVNSIAYQGSRGQQFNHARPVEEYIQRLSLTLPRPRDETLSRHSILGPNGLKGQWQLPIRDKGVRYPTNIDLSPVEIPRMQQSLENGSLDKNNDSISGKTTSDLESILIQSEDGQPKSVHTQSEDCLAQNAKEPGSLISFETTEIPAHTDIIRQPSPPPVLAEVQDLVPAVSPHVMEAECKTETPSDSFVSGEAPLQLHISTSLMESFMKLAKSNTSKNLETCGVLAGSLKNRKFYITALIIPKQESTSDSCQTTNEEEIFEVQDKLSLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPEAVAIVMAPKDSSRNHGIFRLTTPGGMSVIRQCEQRGFHPHSQPPDGGPIYKTCTDVYMNPDLKFDVIDLR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01507 522 Coils Coil 91 111 - -
Bach1g01507 522 SMART pad1_6 347 475 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bach1g01507 522 FunFam AMSH-like ubiquitin thioesterase 3 4 120 - -
Bach1g01507 522 FunFam AMSH-like ubiquitin thioesterase 3 333 522 - -
Bach1g01507 522 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 345 451 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bach1g01507 522 SUPERFAMILY JAB1/MPN domain 347 478 - -
Bach1g01507 522 CDD MPN_AMSH_like 347 522 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Bach1g01507 522 Gene3D - 1 118 - -
Bach1g01507 522 Pfam USP8 dimerisation domain 10 98 IPR015063 -
Bach1g01507 522 Gene3D Cytidine Deaminase, domain 2 328 522 - -
Bach1g01507 522 ProSiteProfiles MPN domain profile. 348 478 IPR037518 -
Bach1g01507 522 PANTHER AMSH-LIKE PROTEASE 3 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01507 Bach-Chr1 28702235 28708883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01507 K11866 - gmx:100800636 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01507 1 28702235 28708883 Bach1g01507 1 28702235 28708883 ECH