Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01363 ATGGGTCGCCAAGCCGTTGCCAAGTTGATCGGCTCCATTGTGTCACGCAGAACCTCTACGTCGTCGCCATTTTCTTCTAATTCTTCTTCGTGGTCTCAGATCCGCCATTACACGGCGGCTCCGCCACCCGCACCCGCCGTCTTCGTTGACAAGAATACACGCGTCATCTGCCAGGGCATCACCGGAAAAAATGGCACTTTCCACACCGAACAGGCCATCGAATACGGAACCAAGATGGTGGGTGGTGTAACGCCAAAGAAGGGTGGAACAGAACACCTGGGACTTCCTGTATTTAATACTGTTGCTGAAGCGAAGGCTGAAACAAAGGCTAATGCTTCAGTCATCTATGTTCCTCCACCATTTGCTGCAGCTGCCATTATGGAGGCAATGGAAGCCGAGTTGGATCTTGTTGTATGCATTACTGAAGGGATTCCTCAGCATGATATGGTACGAGTGAAAGCTGCTCTTAATCGACAGTCCAAAACTCGCCTGATTGGACCAAACTGCCCTGGTATAATCAAGCCTGGGGAATGTAAAATTGGGATCATGCCAGGTTACATACATAAACCTGGCCACGTAGGAATTGTTTCTCGTTCTGGTACCCTGACATATGAAGCGGTCTTTCAAACGACTGTTGTTGGCCTTGGACAATCCACATGTGTGGGTATAGGGGGAGATCCCTTTAACGGAACAAACTTTGTTGATTGTATAACAAAGTTCCTAGAAGATCCCCAGACTGAAGGTATCGTTCTCATAGGAGAGATAGGTGGAACTGCAGAAGAGGATGCAGCTGCACTAATTAAGGAAAGTGGGACACAGAAGCCTATTGTTGCATTTATTGCTGGATTAACTGCCCCTCCTGGCCGCCGCATGGGTCATGCTGGAGCTATTGTATCAGGCGGTAAGGGCACCGCACAAGACAAAATTAAGACCCTAAGGGAAGCTGGAGTGACTGTTGTGGAGTCCCCTGCTAAAATTGGGATCGCCATGCTAGATGCTTTCAAACAGAGGGGCCTGGTGCAATAG 1026 0.4903 MGRQAVAKLIGSIVSRRTSTSSPFSSNSSSWSQIRHYTAAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGHVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCITKFLEDPQTEGIVLIGEIGGTAEEDAAALIKESGTQKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGIAMLDAFKQRGLVQ 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01363 341 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 167 IPR036291 -
Bach1g01363 341 PIRSF SucCS_alpha 44 337 IPR005810 GO:0003824
Bach1g01363 341 Hamap Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 45 334 IPR005810 GO:0003824
Bach1g01363 341 Gene3D - 46 165 - -
Bach1g01363 341 Pfam CoA-ligase 196 317 IPR005811 GO:0003824
Bach1g01363 341 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family signature 1. 197 226 IPR033847 -
Bach1g01363 341 NCBIfam succinate--CoA ligase subunit alpha 48 330 IPR005810 GO:0003824
Bach1g01363 341 FunFam Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial 166 339 - -
Bach1g01363 341 SMART CoA_binding_2 48 144 IPR003781 -
Bach1g01363 341 FunFam Succinate--CoA ligase [ADP-forming] subunit alpha 45 165 - -
Bach1g01363 341 Gene3D - 166 339 IPR016102 -
Bach1g01363 341 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family active site. 282 295 IPR017440 -
Bach1g01363 341 PANTHER SUCCINYL-COA LIGASE SUBUNIT ALPHA 39 339 - -
Bach1g01363 341 SUPERFAMILY Succinyl-CoA synthetase domains 168 331 IPR016102 -
Bach1g01363 341 Pfam CoA binding domain 50 143 IPR003781 -
Bach1g01363 341 PRINTS Succinyl-CoA synthase signature 286 303 - -
Bach1g01363 341 PRINTS Succinyl-CoA synthase signature 126 143 - -
Bach1g01363 341 PRINTS Succinyl-CoA synthase signature 222 240 - -
Bach1g01363 341 PRINTS Succinyl-CoA synthase signature 253 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01363 Bach-Chr1 27084191 27093793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g01363 134 336 Acyl Lipid Metabolism Gene Families AT3G06650 32.710 2.99e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01363 K01899 - qsa:O6P43_008400 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01363 1 27084191 27093793 Bach1g01363 1 27084191 27093793 ECH