Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01229 ATGGCTTCGCATCCTAAAAATGTGGGAATCCTTGCCATGGACATCTACTTCCCTCCTACTTGCGTGCAGCAGGAAGCTTTGGAGGCTCATGATGGCGCAAGCAAAGGAAAATATACTGTTGGACTTGGACAAGATTGCATGTCATTCTGCAGTGAGGTAGAAGATGTTATCTCAATGAGCTTGACTGTTGTTACTTCACTTCTGGGAAAATCTAAAATCGATCCAAAGCAAATTGGACGCTTGGAAGTTGGCAGTGAGACTGTAATTGACAAGAGCAAATCCATTAAGACCTTCCTTATGCAAATTTTCGAGGAGAGTGGTAATACTGACATTGAAGGCGTTGATTCAACAAATGCATGCTATGGTGGAACAGCAGCTTTGTTAAATTGTGCCAATTGGGTGGAGAGTAGTTCATGGGATGGGCGCTATGGACTTGTCGTATGTACAGACAGTGCGGTGTATGCAGAAGGACCTGCTCGTCCCACAGGAGGAGCAGCTGCTATTGCGATGCTGATAGGCCCGGATGCTCCTATTGTGTTTGAAAGCAAGTTCAGAGCCAGTCATATGTCTCATGCCTATGATTTTTACAAGCCAAACCTTGCAAGCGAATACCCAGTTGTTGATGGAAAGCTCTCTCAGACTTGTTATCTCATGGCACTTGATTCCTGCTACAAGAGTTTTTGTGAGAAATTTGAAAAATTGGAAGGGAGGCCATTTTCAATATCAGATTCTGATTATTTTGTGTTTCATTCTCCATATAACAAGCTTGTACAGAAAAGTTTTGGTCGGCTATACTTCAATGATTTCCTTAGAAATCCCAGTTTTGTTGATGAAGTTGCCAGAGGAACCCTAGCACCATTTGCGTCCTTAACTGGTGATGAGAGCTATCAGAGCCGTGATCTCGAAAAGGCAAACCAGCAAGCTGCTAAACGTATATATGATGTGAAGGTGCAACCCACCACATTAATCCCAAAACAAGTTGGTAACATGTACACTGCGTCGCTATATGCAGCATTTGCATCTCTCCTTCACAATAAACATAGCTCATTGGTAGGGAAGCGGGTAGTTATGTTCTCATATGGAAGTGGTTTAACAGCGACGATGTTCTCCTTCCGACTTCAAGAATGTGACCATCCTTTTAGCCTGTCAAATATAGTAGCAGTGATGAACATTTCTGACAAATTGAAGCAGAGGTTTGAGGTTCCTCCAGAAAAATTTGTTGAAACTTTGAAGGTTATGGAGCACCGTTATGGGGCAAAGGACTTTGTGACAAGCAAGGACTGCAGTCTCTTGCCTCCTGGCACCTACTATCTCACTGAAGTGGATTCAATGTACCGACGGTTTTATGCCAAAAAATCTGACGACACCAACACAGCACATAATGCTCCTAAATCTCAGAATAATTTGCATGCTAATGGTAATTGACCCCTTCAAATTTAGAGTTGAAATGTATGCGATTCACCCTCTGAATTTACTTATGTAATTGGCATTTTAGAGATTAAATTTCTTAGAGTTGTCACATTGAATATGTTTGTTATTCGCAGCACTGTAATGGCTATATGTTGGTGGTTGAAATTTAAACGGATATTAGCACATTGGGATGTAGGAGGGGGAGAAATTGCCTGTTTGGGAGACTTTGGGGTGAGTCACACAGTGAAGGGTAACTAAGAATTTACCTAAATTATCTTGTTTCAACTTGTATGGTGTGAGCGAAAGTAGGAGAATGCATCGTGTATGTTGAGTAGACAAAGTGTTCAATGTGAGTTGAAGTCTGACATTGAAAGACGTGAAAGAATATGTAAGTGAAAAAGGGCCTATTA 1820 0.4154 MASHPKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTVGLGQDCMSFCSEVEDVISMSLTVVTSLLGKSKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEESGNTDIEGVDSTNACYGGTAALLNCANWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKFRASHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKSFCEKFEKLEGRPFSISDSDYFVFHSPYNKLVQKSFGRLYFNDFLRNPSFVDEVARGTLAPFASLTGDESYQSRDLEKANQQAAKRIYDVKVQPTTLIPKQVGNMYTASLYAAFASLLHNKHSSLVGKRVVMFSYGSGLTATMFSFRLQECDHPFSLSNIVAVMNISDKLKQRFEVPPEKFVETLKVMEHRYGAKDFVTSKDCSLLPPGTYYLTEVDSMYRRFYAKKSDDTNTAHNAPKSQNNLHANGN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01229 474 Pfam Hydroxymethylglutaryl-coenzyme A synthase N terminal 5 177 IPR013528 -
Bach1g01229 474 MobiDBLite consensus disorder prediction 455 474 - -
Bach1g01229 474 FunFam 3-hydroxy-3-methylglutaryl coenzyme A synthase 3 453 - -
Bach1g01229 474 SUPERFAMILY Thiolase-like 178 450 IPR016039 GO:0016746
Bach1g01229 474 Pfam Hydroxymethylglutaryl-coenzyme A synthase C terminal 178 452 IPR013746 GO:0004421|GO:0006084|GO:0010142
Bach1g01229 474 SUPERFAMILY Thiolase-like 7 175 IPR016039 GO:0016746
Bach1g01229 474 MobiDBLite consensus disorder prediction 459 474 - -
Bach1g01229 474 ProSitePatterns Hydroxymethylglutaryl-coenzyme A synthase active site. 108 123 IPR000590 GO:0004421|GO:0008299
Bach1g01229 474 NCBIfam hydroxymethylglutaryl-CoA synthase 5 452 IPR010122 GO:0004421|GO:0008299
Bach1g01229 474 Gene3D - 2 453 IPR016039 GO:0016746
Bach1g01229 474 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE 1 458 - -
Bach1g01229 474 CDD init_cond_enzymes 7 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01229 Bach-Chr1 25659129 25665514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01229 K01641 - gmx:100794889 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01229 1 25659129 25665514 Bach1g01229 1 25659129 25665514 ECH