Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g01138 TGACTCACTGTGTAGCCTTTGTCCCGTAGAGCCGATACCGACACAAATGGTGGTGTCTCTCCGATTACCTTCTCTTGCCTATCTCTTCGGTTCACCCTCTGGTTCCTCTATTTCCAGACTTTCTCGCCGTGCTCCGGCGATTCTACGGCGGCGCCATCATGGGAATTATCTTCGGCCACGGCTACTTACCGCAGCTCAAAGCACGGCAGCACAGACCGAGGACCGAGTCGATAACTTGAAGAAGGGAATTCAGGACCAAGTTATCACGCCTAGGTCACAGGACTTCAATGCTTGGTATCTTGATGTTATAGCTAATGCTGAGCTCGCTGATTATGGCCCCGTTCGTGGAACTATGGTCATTCGTCCTTACGGTTACGCTATATGGGAAGCGATTCAGGACTATTTGAACGTGAAGTTCAAGGAGACTGGACACAGTAACATGTATTTTCCACAGTTTATTCCATACTCATTTATAGAGAAAGAAGCTAGCCATGTTGAGGGATTCAGCCCTGAGTTAGCACTTGTGACGATTGGAGGAGGAAAGGAACTTGAAGAAAAGCTTGTGGTCCGACCTACAAGTGAAACCATTGTTAATCACATGTTCTCCCAGTGGATTCACAGTTACCGTGATCTTCCTCTTTTGATTAACCAGTGGGCAAATGTCACAAGATGGGAAATGCGCACTAAACCATTTGTAAGGACCCTAGAATTTCTCTGGCAAGAGGGCCACACTGCTCATGCTACTCCAGAAGAGGCAGAAAATGAGGCTATACAGATGATTGACATCTATACCAGATTTGCCTATGAGCAAGCTGCAATACCTGTCATTACAGGTCGAAAATCTAAAGTAGAAACATTTGCTGGTGCTTGTAAGACCTATACAATTGAGGCCATGATGGGTGACAAGAAAGCATTACAAGCGGGAACCAGTCACAACCTTGGGCAAAACTTCTCCCGTGCTTTTGGGACACAGTTCACAGATGAAAATGGACAAAGGCATCATATTTGGCAGACGTCATGGGCAATTAGTACTCGTTTTATTGGAGGTATCATCATGACTCATGGAGATGATGCAGGATTAATGCTTCCCCCAAAGATTACACCAATACAGGTGGTAATTGTACCTATTTGGAAGAAGGATGGTGAGAAAACGGCAGTTCTAAATGCAGCATCATCTGTAAGAGAAGTACTGCAGACAGCAGGAATTAGAGTTAAACTTGATGATTCTGATCAAAAGACCCCAGGATGGAAATTCAATTTCTGGGAGATGAAAGGCGTACCTATTAGAATTGAAATCGGTCCCCGTGATGTGTCTAGTGGAAGTGTGGTGATTTGCAGGAGAGATATTCCTGGGAAGCAAGGGAAAGTATTTGGAATTTCCATGGAATCTTCAGTTTTGGAGTCTTATGTCAAAGACAAGTTGGACGAGATTCAGTCCTCTCTTTTGGATAGGGCAATTTCATTTCGGGACAGTAATATTATAGATGTGAATTCATACGATGAACTTAAAGCTGTTATATCACAAGGCAAATGGGCAAGGGGCCCTTGGTCAGCTAGTGATGAAGATGAGACTAAAGTGAAAGAAGAAACGGGGGCAACGATCAGGTGTTTCCCTTTTGAGCAGCCAAAAGGGGTTAAAAAATGCTTAATGACCGGAAATCCTGCTGAAGAAGTTGCTATTTTTGCCAAATCTTACTAA 1699 0.442 MVVSLRLPSLAYLFGSPSGSSISRLSRRAPAILRRRHHGNYLRPRLLTAAQSTAAQTEDRVDNLKKGIQDQVITPRSQDFNAWYLDVIANAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFSQWIHSYRDLPLLINQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAENEAIQMIDIYTRFAYEQAAIPVITGRKSKVETFAGACKTYTIEAMMGDKKALQAGTSHNLGQNFSRAFGTQFTDENGQRHHIWQTSWAISTRFIGGIIMTHGDDAGLMLPPKITPIQVVIVPIWKKDGEKTAVLNAASSVREVLQTAGIRVKLDDSDQKTPGWKFNFWEMKGVPIRIEIGPRDVSSGSVVICRRDIPGKQGKVFGISMESSVLESYVKDKLDEIQSSLLDRAISFRDSNIIDVNSYDELKAVISQGKWARGPWSASDEDETKVKEETGATIRCFPFEQPKGVKKCLMTGNPAEEVAIFAKSY 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g01138 550 FunFam Proline--tRNA ligase, chloroplastic/mitochondrial 349 473 - -
Bach1g01138 550 SUPERFAMILY C-terminal domain of ProRS 479 550 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach1g01138 550 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 100 348 IPR006195 -
Bach1g01138 550 FunFam Proline--tRNA ligase 68 348 - -
Bach1g01138 550 NCBIfam proline--tRNA ligase 74 550 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach1g01138 550 Pfam Prolyl-tRNA synthetase, C-terminal 484 550 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach1g01138 550 Gene3D Bira Bifunctional Protein; Domain 2 74 348 IPR045864 -
Bach1g01138 550 SUPERFAMILY Class II aaRS ABD-related 344 476 - -
Bach1g01138 550 SUPERFAMILY Class II aaRS and biotin synthetases 79 342 IPR045864 -
Bach1g01138 550 CDD ProRS_core_arch_euk 79 338 IPR033721 -
Bach1g01138 550 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 167 336 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bach1g01138 550 PANTHER PROLYL-TRNA SYNTHETASE 51 550 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach1g01138 550 CDD ProRS_anticodon_zinc 344 550 - -
Bach1g01138 550 Gene3D - 349 472 IPR036621 -
Bach1g01138 550 FunFam Proline--tRNA ligase, chloroplastic/mitochondrial 479 550 - -
Bach1g01138 550 Pfam Anticodon binding domain 355 435 IPR004154 -
Bach1g01138 550 SMART ProRS_C_1_2 484 550 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach1g01138 550 Coils Coil 47 67 - -
Bach1g01138 550 Hamap Proline--tRNA ligase [proS]. 73 550 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach1g01138 550 PRINTS Prolyl-tRNA synthetase signature 172 183 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach1g01138 550 PRINTS Prolyl-tRNA synthetase signature 211 222 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach1g01138 550 PRINTS Prolyl-tRNA synthetase signature 202 210 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach1g01138 550 PRINTS Prolyl-tRNA synthetase signature 131 149 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bach1g01138 550 Gene3D - 479 550 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g01138 Bach-Chr1 24552404 24556650 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g01138 K01881 - gmx:100815508 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g01138 1 24552404 24556650 Bach1g01138 1 24552404 24556650 ECH