Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01302 ATGGATTTGGTAAACCGTTGCAAGGAAAAATTGACATATTTTCGCATAAAAGAGCTCAAAGATGTGCTCACACAACTAAGACTTTCAAAGCAGGGGAAGAAGCAGGATCTTGTTGATCGGATATTAGCAATTCTCTCAGATGAACAAGGTTCCAAAATGTGGGCCAAGAGGCATGCTGTTGCAAAAGAACAGGTGGCAAAACTTGTGGATGACACATATAGAAAAATGCAGATATCTGGGGCTACTGATCTAGCTTCAAAGGGACAGGGAGTCTCAGATAGTAGTAATGTAAAAATTAAAGCTGAACTTGATGATTCCTTTCAGTCTGACATGAAGATTCGCTGTCTCTGTGGAAGTCTATTGGAAACGGAACCCTTGATCAAGTGTGAGGATCCAAGATGCCATATGTGGCAACACATTGGTTGTGTTATAATTCCAGACAAGCCTATGGAAGGCATCCTGCCAGTTCCTGAATTATTTTACTGTGGAATATGTCGACTCAACCGAGCTGATCCTTTTTGGCATTCGTTGCGCCACCCTTTATATCCTGTGAAGTTGACCACAACAAGTATTCCAACTGACGGAACCAATCCAGTGCAGAGTGTGGAGAAAACATTTCAAATTACAAGAGCAGACAAGGACTTATTTTCTAAACAAGAGCATGATGTTCAGGCATGGTGTATGCTTCTGAATGATAAGGTTCCATTCAGGATGCAGTGGCCGCAATATACAGATCTACAGGTCAATGGTATGCCTGTTCGTGCAATTAACAGGCCTGGTTCACAACTTCTTGGGGCTAATGGTCGTGATGATGGTCCAATTATCACGCAGTATATAGAAGACGGAATTAATAAGATTTCCTTAACAGGATGCGATGCTCGTATTTTCTGTCTGGGAGTGCGCATTGTTAGAAGGCGCAGCATGCAACAGATCCTAAACATGATTCCAAAGGAGTCTGACGGTGAGCGTTTTGAAGATGCTTTAGCACGGATCATTCGTTGTGTTGGTGGTGGAAATGCAAGAGATAATGCGGACAGTGACAGTGATTTGGAAGTTGTTTCAGATACTTTTACCATCAACCTACGCTGTCCAATGAGTGGTTCCAGAATGAAGATTGCTGGAAGATTCAAACCTTGTGTTCATATGGGGTGTTTTGACCTTGAAGTTTTTGTGGAAATGAATCAACGTTCAAGGAAATGGCAGTGTCCCATATGCCTCAAAAACTATGCATTAGAGAATATCATTGTTGACCCTTATTTTAATCGTGTCACCTCCCTGATGAGACTTTGTGATGAAGATGTTACAGAGATTGAGGTGAAGCCTGATGGTTCTTGGCGTGTCAAGGCTAAGAGTGAAAGTGAGCGCCGGGATCTAGGGACTCTTTCACAATGGCGCTTTCCTGATGGCACCCTATGTGATTCTTCTGATGGAGATAGTAGAAGAGTGGAAACGTTGAAGCAGATCAAACATGAAGGTGTTTCAGACAGCCCTACTGGTTTAAAACTTGGCATCAGGAAGAACCGCAATGGAGTTTGGGAAGTCAGCAAACCTGAGGACACAAACTCTTCTTCGGATAATAATATATTGAAAGAAATCGTTGGAAATCCTCAACATGTGGTTATTCCGATGAGCAGCAGTGCCACTGGAAGTGGCCAGGATGGTGATGATCCTAGCGTAAATCAGGGTGTAGGTGGGAATATTGATTTCTCTCCTAATAATGGGATGGAGATGGATTCTATTTCTCTCAATGTTAACTCAGCTTATGGGTTTACTGACCATAACACTTCTGCTCCTATGGGGGATGCTGAAGTTATTGTTCTTAGTGATTCTGAAGAGGAAAACGACATATTGATTTCTGGAACTTCATACAAGAATAATGGACCGGATGCTGGAGGAGTTACTTATTCTGTGCCCCCACCTGGAATTGCTGATTCATATGTAGATGATCCCACCCTTGGTGGAAATTCGTTTGAACTTTTTACTGCTAATGATGATGAATATGGGATGCCTCTCTGGTCGTTGCCTTCTGGAACTCAGGGAGGTCCAGGATTCCAATTATTCACTTCTGATGCAGAGGTACCTGATGCATTGGTCCATTTGCAGCATGGTCCTATTAATTGTTCCACATCAATGAATGGTTATGCATTGGCTCCAGATACTGCCTTGGAATCTAATACTCTCATTCCAGACTCCTCTGCAAGTCGACCTGATGCTGATTTGAATGGTGGATTAGTTGACAATCCGTTGGCATTTGCTGGAGATGATCCTTCACTTCAGATTTTTCTCCCTACTAGACCAGCAGAATCATCAATACAGCATGAACTAAGAGATCAGGCAGATGTGTCCAACTGCAATGAGGATTGGATTTCTCTTAGACTTGGAGGTGCTGCTAGTGGTAGCAATGGTGAGCCTACAACTGCAGATGGGTTGAATTCTAGACAGCAAATTCCATCAAGAGACAATGCCATAGATAGTTTGGCTGACACTGCTTCTTTGCTTCTTGGTATGAATGATGCTAGATCTGACAAGGCAAGTAGGCAAAGATCTGATAGCCCTTTCTCATTTCCCCGCCAAAAACGTTCTAAATTGAAGGAAGCTGACAGGCATTTTTGA 2613 0.4275 MDLVNRCKEKLTYFRIKELKDVLTQLRLSKQGKKQDLVDRILAILSDEQGSKMWAKRHAVAKEQVAKLVDDTYRKMQISGATDLASKGQGVSDSSNVKIKAELDDSFQSDMKIRCLCGSLLETEPLIKCEDPRCHMWQHIGCVIIPDKPMEGILPVPELFYCGICRLNRADPFWHSLRHPLYPVKLTTTSIPTDGTNPVQSVEKTFQITRADKDLFSKQEHDVQAWCMLLNDKVPFRMQWPQYTDLQVNGMPVRAINRPGSQLLGANGRDDGPIITQYIEDGINKISLTGCDARIFCLGVRIVRRRSMQQILNMIPKESDGERFEDALARIIRCVGGGNARDNADSDSDLEVVSDTFTINLRCPMSGSRMKIAGRFKPCVHMGCFDLEVFVEMNQRSRKWQCPICLKNYALENIIVDPYFNRVTSLMRLCDEDVTEIEVKPDGSWRVKAKSESERRDLGTLSQWRFPDGTLCDSSDGDSRRVETLKQIKHEGVSDSPTGLKLGIRKNRNGVWEVSKPEDTNSSSDNNILKEIVGNPQHVVIPMSSSATGSGQDGDDPSVNQGVGGNIDFSPNNGMEMDSISLNVNSAYGFTDHNTSAPMGDAEVIVLSDSEEENDILISGTSYKNNGPDAGGVTYSVPPPGIADSYVDDPTLGGNSFELFTANDDEYGMPLWSLPSGTQGGPGFQLFTSDAEVPDALVHLQHGPINCSTSMNGYALAPDTALESNTLIPDSSASRPDADLNGGLVDNPLAFAGDDPSLQIFLPTRPAESSIQHELRDQADVSNCNEDWISLRLGGAASGSNGEPTTADGLNSRQQIPSRDNAIDSLADTASLLLGMNDARSDKASRQRSDSPFSFPRQKRSKLKEADRHF 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01302 870 Gene3D SAP domain 1 64 IPR036361 -
Bach13g01302 870 SUPERFAMILY FYVE/PHD zinc finger 107 169 IPR011011 -
Bach13g01302 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 447 IPR013083 -
Bach13g01302 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 171 IPR013083 -
Bach13g01302 870 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Bach13g01302 870 CDD PHD_Bye1p_SIZ1_like 114 165 - -
Bach13g01302 870 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 624 - -
Bach13g01302 870 MobiDBLite consensus disorder prediction 799 816 - -
Bach13g01302 870 CDD SP-RING_Siz-like 360 409 IPR031141 -
Bach13g01302 870 ProSitePatterns Zinc finger PHD-type signature. 115 165 IPR019786 -
Bach13g01302 870 SMART sap_9 11 45 IPR003034 -
Bach13g01302 870 MobiDBLite consensus disorder prediction 839 870 - -
Bach13g01302 870 MobiDBLite consensus disorder prediction 795 816 - -
Bach13g01302 870 ProSiteProfiles Zinc finger SP-RING-type profile. 346 429 IPR004181 GO:0008270
Bach13g01302 870 MobiDBLite consensus disorder prediction 542 563 - -
Bach13g01302 870 Pfam SAP domain 14 42 IPR003034 -
Bach13g01302 870 FunFam E3 SUMO-protein ligase SIZ2 333 447 - -
Bach13g01302 870 SMART PHD_3 114 166 IPR001965 -
Bach13g01302 870 Pfam MIZ/SP-RING zinc finger 359 407 IPR004181 GO:0008270
Bach13g01302 870 MobiDBLite consensus disorder prediction 841 870 - -
Bach13g01302 870 FunFam E3 SUMO-protein ligase SIZ1 1 66 - -
Bach13g01302 870 SUPERFAMILY SAP domain 1 64 IPR036361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01302 Bach-Chr13 17230594 17238487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01302 - - qsa:O6P43_000303 1357.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01302 13 17230594 17238487 Bach9g00169 9 1184234 1192809 BWGD
Bach13g01302 13 17230594 17238487 Bach13g01302 13 17230594 17238487 ECH