LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g01283	ATGCCCTCTGATACGAGCTCTGCCACCTCCCGCGATGACCAGGCCAACCAATTTATCGAAGATCAATTGGCTTCCGTCACATTGACCCAGTCTGATGACAAACCATCTGGTTCGGCGCATCAAGAAGCAAACGGCGTCGTTGGTGGATCTACTAATCAGAGCACTCAATTCGAAAATGAGGAGCAGGTTCAGAGCAGTTCAGTAGAAGCGGAAGAGGTTGGAGATGTTAGGTCCTCTGCAGAACATGCTGTTGTGTGGGGGAGAACCACTTCGGAGCTCGAAATGGATGGTCTATCGAGCCCTGGTAGTAGTGGCTATGCTGGTGAAAGGGGCAGCAGCAGTGCAACTACCGGGTCTCCGATTGACGAAGTTGTTGGACAGGAAATAGAAGAGGTTAGGAATGATGACACTGTGGATGGAATCTCCCATTCCCAGATGTCGTGGCTTCCTGGGAAGCAACATGTGGATGAGGATGATGCTTCCATATCATGGAGGAAAAGGAAGAAGCATTTTTTTGTTCTGAGTCATTCTGGCAAGCCAATTTATTCTAGATATGGAGATGAACACAAGCTTGCGGGATTTTCGGCTACTTTGCAAGCAATCATTTCCTTTGTGGAGAACGGGGGTGACCGTGTCAAATTGGTGAGGGCTGGAAAGCATAAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTAGTTTGCATCAGCTGCACAGAAGAACCTTATGAGTCATTAAGAGGGCAGTTGGAGCTTATTTATGGTCAGATGATTGTTATATTAACAAAGTCCGTAAGCAGATGTTTTGAGAAGAATCCAAAGTTTGATATGGCACCTCTGCTTGGAGGAACAGATTTCGTCTTCTCTTCTCTAATCCATTCTTTCAACAGGAATCCTGCTACATTCCTTCATGCCTACACTTGTCTTCCCCTTTTGTATGCCACAAGACAAGCTGCAGGTGCTATCTTGCAAGATGTTGCTGATTCAGGTGTTCTATTTGCAATACTAATGTGCAGACACAAGGTGATCAGTCTTGTGGGGGCACAAAAGGCTTCTCTCCATCCTGACGATATGCACTTGTTAGCCAACTTTGTTATATCATCAGAATCCTTTAGGACATCAGAATCATTTTCTCCAGTTTGCTTGCCAAGATATAATCCTTTGGCATTTTTATATGCTTATATCCATTACTTTGATAATGACACATACTTGATTTTGCTGACCACAAGTTCAGATGCCTTCTATCATCTTAAGGATTGCAGGATTCGTATCGAAATGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGTTCAGAGATCCTTGCTAGATGGTGGAATGCACGTTGAGGATCTGCCTGTTGACCCTTTCCCCCGTTCTGGATCATCTCCTCATTTGGGCCAGCACAGACTTCCAACAGATTCTGCCGAAGGATTGAGGGAACCTTATCTTGGCATTGGTGGTCCTGCTGGGTTGTGGCATTTCATATACCGCAGTATCTATCTGGATCAATATGTTTCTTCGGAGTTGTCATCTCCAATTAACAGTCCTCAGCAGCAGAAAAGGCTGTATAGAGCTTACCAGAAAATTTACGCGTCCATGCATGATAAAGGAATTGGACCACATAAGACTCAATTTAGAAGAGATGAAAACTATGTTCTTCTCTGTTGGGTGACACAGGATTTCGAGCTCTATGCTGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCGATAAAGACTTGCAACCGCGTTTGCCAATGGGTGAAGGACGTCGAAAATGAAATATTCTTACTAGGAGCTAGCCCCTTCTCATGGTGA	1812	0.447	MPSDTSSATSRDDQANQFIEDQLASVTLTQSDDKPSGSAHQEANGVVGGSTNQSTQFENEEQVQSSSVEAEEVGDVRSSAEHAVVWGRTTSELEMDGLSSPGSSGYAGERGSSSATTGSPIDEVVGQEIEEVRNDDTVDGISHSQMSWLPGKQHVDEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKLVRAGKHKVVFLVKGPIYLVCISCTEEPYESLRGQLELIYGQMIVILTKSVSRCFEKNPKFDMAPLLGGTDFVFSSLIHSFNRNPATFLHAYTCLPLLYATRQAAGAILQDVADSGVLFAILMCRHKVISLVGAQKASLHPDDMHLLANFVISSESFRTSESFSPVCLPRYNPLAFLYAYIHYFDNDTYLILLTTSSDAFYHLKDCRIRIEMVLLKSNVLSEVQRSLLDGGMHVEDLPVDPFPRSGSSPHLGQHRLPTDSAEGLREPYLGIGGPAGLWHFIYRSIYLDQYVSSELSSPINSPQQQKRLYRAYQKIYASMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDVENEIFLLGASPFSW	603

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	187	207	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	221	235	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	402	428	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	169	186	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	568	581	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	272	284	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	552	566	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	374	397	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	301	322	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	349	365	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	581	601	IPR004353	GO:0006623
	Bach13g01283	603	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	325	338	IPR004353	GO:0006623
	Bach13g01283	603	MobiDBLite	consensus disorder prediction	105	121	-	-
	Bach13g01283	603	PANTHER	SAND PROTEIN-RELATED	38	601	IPR004353	GO:0006623
	Bach13g01283	603	Pfam	First Longin domain of FUZ, MON1 and HPS1	169	289	IPR043972	GO:0016192
	Bach13g01283	603	MobiDBLite	consensus disorder prediction	1	121	-	-
	Bach13g01283	603	Pfam	Second Longin domain of FUZ, MON1 and HPS1	330	421	IPR043971	GO:0016192
	Bach13g01283	603	Pfam	Third Longin domain of FUZ, MON1 and HPS1	489	589	IPR043970	GO:0016192
	Bach13g01283	603	MobiDBLite	consensus disorder prediction	1	72	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g01283	Bach-Chr13	17080549	17085252	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach13g01283	K20195		-	qsa:O6P43_028373	962.214

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach13g01283	13	17080549	17085252	Bach9g00192	9	1358074	1362210	BWGD
	Bach13g01283	13	17080549	17085252	Bach13g01283	13	17080549	17085252	ECH