LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g01282	CTACCTTTCTGCTGCACAGCCCTTCCTCCCCCCTTTCCTCTCTGTCTTAACTCTGCCATTTCTGAAGCTACAAAACCCTTAAAACCTTGATCTTGCCGGAGAATTAGCTCCGAAAGCGCCAAACAGGAGCAAGCCCGTGCCTTTGTCATCCGGTCCGAACCGAAACGGGTTGATCCGATCTGGCTCCGCCTACCACTTCCCCAAGCGAACCACTTTCTTAAGTAAGAAAGTGCGGAGCTTACAGAGCAGAAATGTACAAGAACCAGCTTCAAGAGCTGGCTCAGCGGAGCTGCTTCAACCTCCCTTCATATACTTGCATTAGGGAAGGTCCCGATCATGCGCCGAGGTTCAAGGCCACGGTTAACTTTAACGGCGAGATCTTCGAGAGCCCTCACCATTGTTCTACTCTCCGTCAAGCCGAACACTCTGCCGCTGAGGTTGCGCTCAATTCTCTCTCCAACCGTGGACCCTCACACTCGCTTGCTGCAAGGATCCTGGATGAGACAGGAGTCTACAAGAATCTATTGCAAGAAATAGCACAGAGGGTTGGAGCTCCATTGCCCCAGTACATGACATTCAGGTCAGGCCTAGGACATCTACCCATTTTTACTGGGACAGTAGAATTGGCTGGAATCACATTTACTGGTGAACATGCCAAGAACAAGAAACAGGCAGAGAAAAATGCAGCTATGGCTGCTTGGTCATCTTTAAAACAATTGGCAAAAGAAACTGTTATTTCTTCATCTGAACCAGAGAACAATGATGAACTAGAACAGATCACTATAGCAAGGGCGTTGCTGAACTACCGTCTGAAGGAAAAGATGGCAATGTCTAATCCTAATGCTCCAATTCCATTTCCAAAGAAGTTTCAGATTCAAAATCCTAGGCCAACCAGTCCGCAACCTCCCCCTGCAACTACATCAAAAATCCTGCCTCTGATTTGCCAGAAGACAACACCTCGAATCAGGTTCTCATTGACAACAGCAAATGAAAGTCCTCGAAGCAGGGCTCATCTTGCGGCGGCAACCAGTGACAGTCCCATGGTGTCATCACAATCTTGTCCACCAGAAAGTCGTTGTGCCCGTCCCCTGAAGTTCCCTGCAGCAGGAGCAGCACCTTATGTCCCTATTCGACAAATGAGATTGCCTTGCCAGAGTATTGCACCTCCAGTGACTATTAGGACTGCAGTACCTGTGTTCTCCGCACCACCTCGTCAACCACCACCAGCTGCTGTTCCCTCTCAGATGATTCGGGCCCCTGCTGTACGAGTTGCCCCTCCAGTCACTGTTAGGCAGGCAATTCCAGTATTTGCTGCTCCGCCAGTTCGAAAAGAACCTGCTGCCATCCGAAAAGAAGATCCACTGATTCTTAGCAGTGCTCCCACACCGCAAGATAATTCGGCAGCTAAAGTTCAGGAGACAGAGACACAGACTGAGAACAGCACAGCAGTATCTCAGACAGTGCAGAGCTTGGAGCAGTTGAAAATTTGA	1490	0.494	MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHHCSTLRQAEHSAAEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYMTFRSGLGHLPIFTGTVELAGITFTGEHAKNKKQAEKNAAMAAWSSLKQLAKETVISSSEPENNDELEQITIARALLNYRLKEKMAMSNPNAPIPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKTTPRIRFSLTTANESPRSRAHLAAATSDSPMVSSQSCPPESRCARPLKFPAAGAAPYVPIRQMRLPCQSIAPPVTIRTAVPVFSAPPRQPPPAAVPSQMIRAPAVRVAPPVTVRQAIPVFAAPPVRKEPAAIRKEDPLILSSAPTPQDNSAAKVQETETQTENSTAVSQTVQSLEQLKI	412

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g01282	412	CDD	DSRM_AtDRB-like_rpt1	1	69	IPR044450	GO:0003725
	Bach13g01282	412	MobiDBLite	consensus disorder prediction	365	412	-	-
	Bach13g01282	412	SMART	DRBM_3	88	154	IPR014720	-
	Bach13g01282	412	SMART	DRBM_3	2	69	IPR014720	-
	Bach13g01282	412	SUPERFAMILY	dsRNA-binding domain-like	88	165	-	-
	Bach13g01282	412	FunFam	Double-stranded RNA-binding protein 2	84	155	-	-
	Bach13g01282	412	PANTHER	-	1	357	-	-
	Bach13g01282	412	SUPERFAMILY	dsRNA-binding domain-like	2	68	-	-
	Bach13g01282	412	MobiDBLite	consensus disorder prediction	375	412	-	-
	Bach13g01282	412	CDD	DSRM_AtDRB-like_rpt2	86	154	IPR044451	GO:0003725
	Bach13g01282	412	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	1	70	IPR014720	-
	Bach13g01282	412	FunFam	Double-stranded RNA-binding protein 2	1	70	-	-
	Bach13g01282	412	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	87	155	IPR014720	-
	Bach13g01282	412	Pfam	Double-stranded RNA binding motif	2	68	IPR014720	-
	Bach13g01282	412	Pfam	Double-stranded RNA binding motif	88	153	IPR014720	-
	Bach13g01282	412	Gene3D	-	84	154	-	-
	Bach13g01282	412	Gene3D	-	2	83	-	-
	Bach13g01282	412	Coils	Coil	404	412	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g01282	Bach-Chr13	17074677	17078334	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach13g01282	-		-	gmx:100815739	581.252

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach13g01282	13	17074677	17078334	Bach9g00193	9	1367332	1370914	BWGD
	Bach13g01282	13	17074677	17078334	Bach13g01282	13	17074677	17078334	ECH