Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01219 ATGGCGGCCACTTTTCCCGCTTGGATTCTCATCGCGATCGCACTGTTGTCGGCCGAGGTGCTTTCTCTTGGGTTTCCGGTGACTCTGACGCTGGAAAGAGCTTTTCCGACGAATCATGGAGTGGAGTTGAGTCACCTCAGAGCTCGGGACAAGATAAGGCATGGAAGAATGTTGCAATCTTCAAACGGTGTTGCTGATTTCTCAGTTCTAGGGACCTTCGATCCCTTCTTAGTCGGGCTTTACTTTACGAAGGTGCAGCTGGGTACTCCTCCCAGAGAGTTTTATGTGCAGATTGACACTGGCAGTGACGTTCTCTGGGTTAGTTGTGGCTCCTGTACTGGTTGTCCCCTCACAAGTGGTCTCGAAATTCAGCTCAATTTTTTTGACCCCGGGAGTTCATCAACATCTTCATTGGTCTCTTGTTCTGACCGGAGATGCAGCAGTGGAGTTCTATCAGCAGATGCCAGCTGCTACAGTCAGAACAATCAGTGCACCTACACATTCCAGTATGGAGATGGCAGTGGGACATCAGGCTATTACATCTCAGACTTGATGCGTTTTGACACTATCTTAGAGGGATCTGTGATTACAAATTCTTCAGCACCTATAGTTTTTGGGTGTAGCACCCTGCAGACTGGGGACTTGAAGAAGTCAGATAGAGCAGTTGATGGAATATTTGGATTTGGGCAACAGAGCATGTCTGTCATCTCCCAGCTCTCCTCACAAGGAATAGCGCCGGGAGTGTTCTCTCACTGCCTTAATGGAAATAGTGGCGGGGGCATATTGGTTCTTGGTGAGATTGCGGAGCCAACTATAGTTTATAGTCCACTGGTTCCATCACAGCCTCATTACAATCTAAATCTGTTGAGCATCTCTGTCAATGGGCAACTGTTGCCCATTGATGCATCAGTTTTTGAAACATCAACTAACCGAGGTACCATTGTTGATTCTGGAACAACTTTGGCGTACCTTGCAGAAGAGGCATACGAACCCTTTGTCAGTGCAATAACAGCTGCAGTTCCACAATCTGTACACACTGTTCCATCCAGGGGGAACCAGTGTTACTTAGTCACCTCCAGCATCTCTGATATTTTTCCTCAAGTAAGTCTGAACTTTGCTGGTGGTGCATCCATGGTTTTAAGACCAGGGGACTATCTTATACAGCAGAGTTCCATTGTTGGTGCTGCTGTGTGGTGTATAGGCTTTCAGAGAATTGAGGGTCAAGGGACAACAATTTTAGGAGATCTTGTACTGAAAGACAAGATTATTGTTTATGATCTGGCTGGTCAACGGATTGGATGGGCTAACTATGACTGCTCAACGTCAGTTAACGTTTCTGCAACAACTGGGATGCGCAGAAGTGAATTTGTAAATGCAGGAGAGCTGAGTGGTAGCACTTCTCTAATTGATGGGCCTTTCAAGTTGATAACAGGAGTCTTGGCTTTAACCGTCATCAGCAGCCTTGTGATTTTGTAGCATATAGTTGATGGGATTTGCGACTCTAATTTTTTCTTCTCATATACATTGTCTTGCCGATAAGTATTTGTGGCAATCTGCAAGACCGCGTTGTTGTATTGATTGTGGCCTGTCGCTGCCTTTTGCAGGATAGCAATGTCAAATGTCAATTCTAGCTTCAGGTCATTATGTTTATTACTCTGTTAGTCATGTATAATTAGACCATTCCTCCATTTTTTTGGGGCAGCATTGTAAATTAATTATACCCATACTGACTTGTTCCTAGTCATGATTTATACAAATTTTGTTTTCCA 1769 0.4477 MAATFPAWILIAIALLSAEVLSLGFPVTLTLERAFPTNHGVELSHLRARDKIRHGRMLQSSNGVADFSVLGTFDPFLVGLYFTKVQLGTPPREFYVQIDTGSDVLWVSCGSCTGCPLTSGLEIQLNFFDPGSSSTSSLVSCSDRRCSSGVLSADASCYSQNNQCTYTFQYGDGSGTSGYYISDLMRFDTILEGSVITNSSAPIVFGCSTLQTGDLKKSDRAVDGIFGFGQQSMSVISQLSSQGIAPGVFSHCLNGNSGGGILVLGEIAEPTIVYSPLVPSQPHYNLNLLSISVNGQLLPIDASVFETSTNRGTIVDSGTTLAYLAEEAYEPFVSAITAAVPQSVHTVPSRGNQCYLVTSSISDIFPQVSLNFAGGASMVLRPGDYLIQQSSIVGAAVWCIGFQRIEGQGTTILGDLVLKDKIIVYDLAGQRIGWANYDCSTSVNVSATTGMRRSEFVNAGELSGSTSLIDGPFKLITGVLALTVISSLVIL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01219 491 FunFam Aspartic proteinase-like protein 2 64 266 - -
Bach13g01219 491 SUPERFAMILY Acid proteases 76 443 IPR021109 -
Bach13g01219 491 Gene3D Acid Proteases 267 446 IPR021109 -
Bach13g01219 491 CDD pepsin_A_like_plant 81 439 IPR034161 -
Bach13g01219 491 Pfam Xylanase inhibitor C-terminal 283 435 IPR032799 -
Bach13g01219 491 Gene3D Acid Proteases 69 266 IPR021109 -
Bach13g01219 491 PRINTS Pepsin (A1) aspartic protease family signature 87 107 IPR001461 GO:0004190|GO:0006508
Bach13g01219 491 PRINTS Pepsin (A1) aspartic protease family signature 411 426 IPR001461 GO:0004190|GO:0006508
Bach13g01219 491 PRINTS Pepsin (A1) aspartic protease family signature 313 324 IPR001461 GO:0004190|GO:0006508
Bach13g01219 491 PANTHER ASPARTYL PROTEASES 25 433 IPR001461 GO:0004190|GO:0006508
Bach13g01219 491 FunFam Aspartic proteinase-like protein 2 267 446 - -
Bach13g01219 491 ProSiteProfiles Peptidase family A1 domain profile. 81 435 IPR033121 -
Bach13g01219 491 Pfam Xylanase inhibitor N-terminal 81 265 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01219 Bach-Chr13 16591271 16594340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01219 76 440 Miscellaneous Gene Families AT1G44130 25.326 1.72e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01219 - - qsa:O6P43_028458 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01219 13 16591271 16594340 Bach9g00262 9 1885350 1890073 BWGD
Bach13g01219 13 16591271 16594340 Bach13g01219 13 16591271 16594340 ECH