Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01215 ATGGCGTCGTCTACTAGGGTTGATCTGGACGGAAACCCCATAAAACCAATCACCATCTGCATGATCGGCGCCGGAGGGTTCATTGGGTCCCACCTATGTGAGAAGATTCTATCGGAGACACCGCACAAGGTCCTTGCCTTGGATGTGTACAATGACAAGATCAAGCACCTTCTTGAGCCGGACTCAGGCGCCTGGGCTGGCCGCATCCAGTTCCACCGCCTCAACATCAAGAACGACTCTAGGCTTGAGGGTCTCATCAAGATGGCAGATCTGACGATAAATCTAGCTGCAATTTGTACTCCCGCGGATTACAATACCCGTCCTCTTGACACAATTTACAGCAATTTCATTGATGCGCTTCCCGTGGTAAAGTACTGCTCGGAAAATAACAAGCGTCTCATTCATTTTTCCACTTGTGAAGTTTATGGGAAAACGATTGGTAACTTTCTACCAAAAGATAGCCTTCTTCGTCAGGATCCTGCGTACTATGTTCTTAAAGAAGATGCCTCTCCATGCATATTTGGTCCTATTGAAAAGCAGAGATGGTCTTATGCCTGTGCTAAACAATTGATTGAGAGGCTGGTTTATGCTGAGGGTGCTGAAAATGGCCTGGAGTTTACAATTGTGAGGCCGTTTAACTGGATTGGACCTAGGATGGATTTCATACCTGGCGTTGATGGACCAAGTGAGGGTGTCCCTCGGGTTCTAGCTTGCTTTAGTAACAATCTTCTGCGCAGGGAGCCTCTCAAGCTTGTGGATGGTGGCCAATCTCAGAGGACTTTTGTCTACATTAAGGATGCTATTGAAGCTGTTTTATTGATGATTGAAAATCCTTCGAGGGCTAATGGACATATTTTTAATGTGGGTAATCCAAACAACGAGGTCACAGTTAGACAGCTTGCTGAAATGATGACTCAGGTCTACTTGAAGGTTAGTGGAGAACCGCCTCTTGACGTACCTACAATTGACGTGAGCTCCAAAGAATTCTACGGTGAGGGTTATGATGATAGCGACAAGAGAATTCCTGACATGACCATAATCAACAGGCAGCTTGGATGGAATCCTAAGACCTCGCTTTGGGACCTTCTTGAATCAACCCTCACTTATCAGCATAGGACATATGCTGAAGCCATCAAGAAAGTCACTGCGAAACCAATTGCAAGCTAA 1167 0.4593 MASSTRVDLDGNPIKPITICMIGAGGFIGSHLCEKILSETPHKVLALDVYNDKIKHLLEPDSGAWAGRIQFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGNFLPKDSLLRQDPAYYVLKEDASPCIFGPIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPSRANGHIFNVGNPNNEVTVRQLAEMMTQVYLKVSGEPPLDVPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVTAKPIAS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01215 388 Pfam NAD dependent epimerase/dehydratase family 19 289 IPR001509 -
Bach13g01215 388 Gene3D - 17 380 - -
Bach13g01215 388 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 18 373 - -
Bach13g01215 388 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 371 IPR036291 -
Bach13g01215 388 CDD Arna_like_SDR_e 18 373 IPR045869 GO:0016831
Bach13g01215 388 FunFam UDP-D-apiose/UDP-D-xylose synthase 2 17 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01215 Bach-Chr13 16555770 16558449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01215 17 383 Miscellaneous Gene Families AT1G02000 21.717 6.83e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01215 K12449 - tcc:18590419 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01215 13 16555770 16558449 Bach9g00268 9 1928980 1931259 BWGD
Bach13g01215 13 16555770 16558449 Bach13g01215 13 16555770 16558449 ECH