Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01201 ATGCAGGCTCTTTCTCGCCCTTCTCCCGGTAGCGGCAGCCTCAACTATCCAGTTAGGACCCGTTCTTCATCTAATCGGGTCGGTCCGAACCGAATCATCATCAAATGCGCTTACGGCGTCGAATCCCCCGGGTTCCCCCTCGGAGTCGGCTCCAATCGAGCTGACTGGCAGAGCTCCTGCGCCATCTTAGCTAGTAAGGTCTCACAAGAACAGTCTTCTAATCAGAAAAACAACAGTAGTGCTGAACACGTCGCCGCCGTTAACGGCCACAAGGCTGGCGTAACTGACCTCAGCCTTGTTCCCATCGGTAACCTTGGCAGTAGCGACAATAACAAGCCGATTCCACCTAAGCCGCTCACCATTTCCGACCTCTCGCCGGCTCCGATGCATGGCTCGCTGCTACGCGTGGCTTATCAGGGTGTTCCCGGAGCTTACTCTGAAGCGGCTGCCGGCAAGGCCTATCCAAACTGTGAAGCCATTCCCTGTGACCAATTCGAGGTAGCTTTCCAAGCGGTGGAGCTCTGGATCGCCGATCGAGCAGTTCTTCCTGTTGAGAACTCTCTTGGCGGTTCGATCCACCGAAATTACGACCTGCTCCTCCGTCACCGCCTCCACATCGTCGGAGAAGTCCAACTTCCAGTCCACCACTGCCTGCTAGCACTGCCTGGAGTGCGAAAAGAGTTCCTAACCCGCGTGATATCTCATCCACAAGCCCTTGCCCAATGCGAGAACACATTAACCAAATTGGGCCTCTCCGTTGCCCGTGAAGCCGTGGACGACACCGCCGGCGCCGCGGAATTCGTAGCTACCAAAAATCTCCGCGATACGGCGGCAATTGCCAGCGCACGCGCGGCGGAGCTGTACGGTTTACAGGTTTTGGCAGATGGGATCCAGGACGACCCGAGTAACGTGACCCGGTTCGTGATGCTGGCCCGGGAACCCATAATACCTCGTACGGATAGGCCATTCAAGACTAGCATAGTTTTCGCACATGACAAGGGTACGTCAGTGCTATTCAAGGTTTTGTCAGCGTTTGCCTTCAGGAACATTAGCTTGACGAAGATCGAGTCGAGGCCTCACCGTAACCGTCCGATTAGGCTGGTGGATGATGCCAATGTGGGGACAGCAAAGCACTTCGAGTACATGTTCTACGTAGATTTTGAAGCTTCCATGGCAGAAGTCAGAGCCCAAAATGCCTTAGCGGAGGTGCAGGAGTTCACATCTTTCTTGAGGGTACTGGGTAGCTATCCTATGGATATGACACCTTGGAGTCCTTCGTCTTGCCCTCAGGAAGATTAG 1299 0.5473 MQALSRPSPGSGSLNYPVRTRSSSNRVGPNRIIIKCAYGVESPGFPLGVGSNRADWQSSCAILASKVSQEQSSNQKNNSSAEHVAAVNGHKAGVTDLSLVPIGNLGSSDNNKPIPPKPLTISDLSPAPMHGSLLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQALAQCENTLTKLGLSVAREAVDDTAGAAEFVATKNLRDTAAIASARAAELYGLQVLADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSCPQED 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01201 432 FunFam Arogenate dehydratase 130 217 - -
Bach13g01201 432 ProSitePatterns Prephenate dehydratase signature 2. 352 359 IPR018528 GO:0004664|GO:0009094
Bach13g01201 432 SUPERFAMILY Periplasmic binding protein-like II 135 318 - -
Bach13g01201 432 SUPERFAMILY ACT-like 307 419 IPR045865 -
Bach13g01201 432 ProSiteProfiles Prephenate dehydratase domain profile. 135 312 IPR001086 GO:0004664|GO:0009094
Bach13g01201 432 FunFam Arogenate dehydratase 319 420 - -
Bach13g01201 432 Gene3D - 219 300 - -
Bach13g01201 432 CDD ACT_CM-PDT 324 417 - -
Bach13g01201 432 Gene3D - 319 420 - -
Bach13g01201 432 FunFam Arogenate dehydratase 218 300 - -
Bach13g01201 432 ProSiteProfiles ACT domain profile. 326 417 IPR002912 -
Bach13g01201 432 Pfam Prephenate dehydratase 136 314 IPR001086 GO:0004664|GO:0009094
Bach13g01201 432 CDD PBP2_Ct-PDT_like 135 314 - -
Bach13g01201 432 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 37 426 - -
Bach13g01201 432 MobiDBLite consensus disorder prediction 1 25 - -
Bach13g01201 432 ProSitePatterns Prephenate dehydratase signature 1. 288 310 IPR018528 GO:0004664|GO:0009094
Bach13g01201 432 Gene3D - 131 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01201 Bach-Chr13 16429410 16430708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01201 K05359 - qsa:O6P43_000427 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01201 13 16429410 16430708 Bach9g00279 9 2042882 2044180 BWGD
Bach13g01201 13 16429410 16430708 Bach13g01201 13 16429410 16430708 ECH