Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01046 ATGTCTGGGTTCTTGGGATTGGTTGTGGGTCTTTTGGTGGTGGGGGTGGCTTCCTCTGCCAAATTTGATGAACTTTTCCAGCCAAGCTGGGCTTTGGACCATTTCGTCCATGAAGGAGACCTTCTTAAGCTAAAGCTTGATAATTATTCTGGTGCTGGTTTTGTATCCAAAAACAAGTATATGTTTGGAAAAGTGACCATTCAACTTAAGCTTGTGGAGGGTGACTCTGCTGGAACTGTTACTGCCTTCTATATGTCATCGGAGGGCTCAAATCACAATGAATTTGATTTTGAGTTCTTGGGCAACACCAGTGGGGAACCTTACTCTGTCCAGACCAATGTGTATGTGAATGGCATCGGTAATAGGGAGCAAAGGCTAAACCTCTGGTTCGACCCCACCAAGGATTTCCACACCTACTCCGTTTTCTGGAATCAGCGTCAAGTTGTGTTCCTAGTTGATGAGACCCCAATTAGGGTGCACACAAATATGGAGCACAAAGGCATTCCTTTCCCGAAAGACCAGGCCATGGGCGTATACAGCTCAATATGGAATGCAGACGACTGGGCCACTCAGGGTGGTCGGGTGAAGACGGATTGGAGCCACGCACCATTCTTTGTCACCTATAAGGCCTTCGAAATCAATGCCTGCGAATGCCCCGCTTCTGTGGCATCTGTTGATATTACTAAAAAATGCAGCAGCAGTGAGGATAAGAAGTATTGGTGGGACGAGCCTACATTGTCTGCGTTGAATTTGCACCAGAGCCACCAGCTTATGTGGGTTAGGGCCAATCATATGGTCTATGACTACTGTAGTGACACTGCTAGGTTCCCTGTAATCCCTTCTGAGTGTGTCCATCACCGTCACCAGTGA 870 0.4736 MSGFLGLVVGLLVVGVASSAKFDELFQPSWALDHFVHEGDLLKLKLDNYSGAGFVSKNKYMFGKVTIQLKLVEGDSAGTVTAFYMSSEGSNHNEFDFEFLGNTSGEPYSVQTNVYVNGIGNREQRLNLWFDPTKDFHTYSVFWNQRQVVFLVDETPIRVHTNMEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFFVTYKAFEINACECPASVASVDITKKCSSSEDKKYWWDEPTLSALNLHQSHQLMWVRANHMVYDYCSDTARFPVIPSECVHHRHQ 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01046 289 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 2 208 IPR000757 GO:0004553|GO:0005975
Bach13g01046 289 Pfam Glycosyl hydrolases family 16 26 200 IPR000757 GO:0004553|GO:0005975
Bach13g01046 289 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 236 283 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Bach13g01046 289 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 287 IPR013320 -
Bach13g01046 289 CDD GH16_XET 17 283 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bach13g01046 289 Gene3D - 11 289 - -
Bach13g01046 289 PRINTS Glycosyl hydrolase family 16 signature 52 70 IPR008264 GO:0004553|GO:0005975
Bach13g01046 289 PRINTS Glycosyl hydrolase family 16 signature 110 123 IPR008264 GO:0004553|GO:0005975
Bach13g01046 289 PRINTS Glycosyl hydrolase family 16 signature 128 145 IPR008264 GO:0004553|GO:0005975
Bach13g01046 289 FunFam Xyloglucan endotransglucosylase/hydrolase 9 285 - -
Bach13g01046 289 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 18 283 IPR044791 GO:0004553
Bach13g01046 289 PIRSF EndGlu_transf 3 288 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01046 Bach-Chr13 15175855 15177852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01046 52 288 Glycoside Hydrolase AT4G03210 74.684 6.95e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01046 K08235 - gmx:100801567 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00433 9 3121810 3123786 Bach13g01046 13 15175855 15177852 BWGD