Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00889 ATGATTTCTTCTGGCAAAATCAAATCCGTTGATTTTTACCGGAAAATTCCCAGAGATTTGACCGAGGCATCATTATCTGGAGCAGGATTATCCATAATAGCAGCGCTCTCCATTATGTTTTTATTTGGAATGGAACTAAGTAATTATATGTCTGTCAGCACCTCCACATCTGTGATTGTTGACAAGAGTTCTGATGGGGACTTCTTACGTATAGATTTCAATATCAGTTTTCCTGCACTCTCATGTGAATTTGCATCAGTTGATGTGAGTGATGTGCTGGGAACAAACAGGCTGAATATAACAAAAACAATTCGCAAGTTTTCTATTGATTCAAATTTAAGACCAACTGGCTCTGAGTTTCATTCAGGACCAGTTCCAAGCTCTATTAAGCATGATGATGAAGCAGATGAAGAATTCATTGATGGTTCTCTTTCACTCACGGCACATAATTTTGATAAATTTTCTCATCAGTTTCCCATTTTGGTTGTAAATTTTTTTGCTCCATGGTGCTACTGGAGTCAACGCTTGAAACCTTCATGGGAGAAGACAGCTAAAATGATAAGAGAGAGATATGATCCAGAAATGGATGGGCGAATACTTTTGGCGAAGGTTGATTGCACTCAAGAAGGTGACTTATGTAGGAGGAATCACATTCAAGGGTATCCATCTATTCGCATCTTTCGTAAAGGAAGTGATGTTAGAGATGACCATGGACACCATGACCATGAATCATATTATGGAGATCGAGATACAGATAGCCTATTCAAGTTTATGGAGGATTTAGTGACATCTCTCCCAACAGAATCTCGGAAACTAGCTTTAGAGGATAAATCTAATGGAACAGAGAGCGCAAAAAGACCAGCACCATCAGCAGGTGGATGTAGACTTGAAGGACATGTGCGTGTTAAAAAGGTTCCGGGAAACTTAATCATTTCGGCTCATTCTGATTCTCATTCGTTCGATGCTTCTCAAATGAACATGTCACATGTCATATCCAATTTGTCATTTGGAAGGAAAATCTCACCTAGGGTCATGAGTGATGTCAAGCATTTGATACCTTATCTTGGTAGCAGCCATGAGAGGTTAAATGGTCGGTCATTCATCTATCAACGTGATTTAGGAGCAAATGTTACTATAGAGCATTATCTTCAGATAGTTAAAACAGAGGTCATAACTAGAAAAAATTATAAATTAATTGAGGAGTATGAGTACACAGCGCACAGCAGTGTGGCACAGAGTCTACACATTCCTGTGGCAAAGTTCCATTTGGAGCTCTCTCCCATGCAGGTCTTAATAACAGAAAACCAGAAGTCTTTTTCACATTTTATCACAAATGTCTGTGCTATTATTGGGGGTGTCTTCACGGTTGCCGGAATCATTGACTCAATTTTGCACAACACACTCAGAATGATGAAAAAAGTTGAGCTCGGCAAAAATTTTTGA 1443 0.3902 MISSGKIKSVDFYRKIPRDLTEASLSGAGLSIIAALSIMFLFGMELSNYMSVSTSTSVIVDKSSDGDFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTIRKFSIDSNLRPTGSEFHSGPVPSSIKHDDEADEEFIDGSLSLTAHNFDKFSHQFPILVVNFFAPWCYWSQRLKPSWEKTAKMIRERYDPEMDGRILLAKVDCTQEGDLCRRNHIQGYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDSLFKFMEDLVTSLPTESRKLALEDKSNGTESAKRPAPSAGGCRLEGHVRVKKVPGNLIISAHSDSHSFDASQMNMSHVISNLSFGRKISPRVMSDVKHLIPYLGSSHERLNGRSFIYQRDLGANVTIEHYLQIVKTEVITRKNYKLIEEYEYTAHSSVAQSLHIPVAKFHLELSPMQVLITENQKSFSHFITNVCAIIGGVFTVAGIIDSILHNTLRMMKKVELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00889 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 6 479 IPR045888 -
Bach13g00889 480 MobiDBLite consensus disorder prediction 269 293 - -
Bach13g00889 480 Pfam Thioredoxin 145 243 IPR013766 -
Bach13g00889 480 FunFam Protein disulfide-isomerase 5-4 131 287 - -
Bach13g00889 480 ProSiteProfiles Thioredoxin domain profile. 114 263 IPR013766 -
Bach13g00889 480 SUPERFAMILY Thioredoxin-like 144 261 IPR036249 -
Bach13g00889 480 Pfam Endoplasmic reticulum vesicle transporter 289 461 IPR012936 -
Bach13g00889 480 Gene3D Glutaredoxin 140 287 - -
Bach13g00889 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Bach13g00889 480 CDD PDI_a_family 144 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00889 Bach-Chr13 14148752 14158278 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00889 - - gmx:100787595 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00889 13 14148752 14158278 Bach13g00889 13 14148752 14158278 ECH