Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00878 TTCAGTGGTTCGAGACTCCAGTCAGAAGTCGAAGAAATCGTTGGTATAGAAGATTGCATTGCTGGTACAATAATTGTTGTAGAATCCGGGGCAATGGGTAGGTATGAGCCCAAGTATCCTTTGGGGTGTGAACCTGTGGTGGGTTCGTTATCATCGTCAAAGAAGAAGGAATACAAGGTTACCAATCGCCTTCAAGAGGGAAAGCGCCCAATATACGCTATCTCGTTCAACTTCATCGACTCCAATTACCTAAACGTTTTCGCCACTGCCGGTGGCAACCGGGTTACTGTTTATCAATGCCTTGAAGGAGGAATCATTGCTCTGTTGCAATCTTACATAGATGAAGATGTAAGTGAAGACTCTAAGGAGGAATCCTTTTACACGGTGAGCTGGGCATCCGGCACTGATGGGACCCCGCTTGTTGTTGCTGGAGGATTCAATGGTATAATCCGAGTCATTGATATTGGTAGAGAGAAGATATATAAGAGTTTTACTGGCCATGGGGACTCTATAAATGAAGTCAGAACTCAACCACTGAGGCCATCACTTATAGTGTCTGCAAGCAAAGATGAGTCTGTCCGGTTATGGAATGTTCATACGGGAATATGTGTTTTGATATTTGCTGGAGCTGGGGGTCACCGTAATGAAGTTTTGAGTGTGGACTTTCATCCATCAGATAGGTATCGAATTGCCAGTTGTGGGATGGATAATACTGTCAAGATATGGTCTATGAAGGAGTTCTTGCCATACGTAGAGAAATCATTCACATGGACAGATCTTCCTTCTAAGTTTCCAACAAAATATGTTCAATTTCCTAGTGTTGACAATGAAATTGTGTTGTGGGAACCTAAACTGAAGGAACAAATTCCAGGGGAGGGTTCAGCTGACATTCTTCAGAAATACCCTGTTCCTGAGTCCGATATCTGGTTCATCAAGTTTTCTTGTGATTTCAAATACAATGCAGTTGCAATAGGGAACAGGGAAGGTAAGATATTCATTTGGGAAGTGCAGTCTAGTCCTCCTGTTCTTATTGCAAGGTTGTCCAATGCTCAATCAAAAGCACCAATCAGACAGACTGCTTTATCCTTTGATGGAAGCACTCTTCTGTGTTCCTGTGAGGATGGGACAATATGGCGCTGGGATGCTGTTACAAGTTCCTAA 1161 0.4315 MGRYEPKYPLGCEPVVGSLSSSKKKEYKVTNRLQEGKRPIYAISFNFIDSNYLNVFATAGGNRVTVYQCLEGGIIALLQSYIDEDVSEDSKEESFYTVSWASGTDGTPLVVAGGFNGIIRVIDIGREKIYKSFTGHGDSINEVRTQPLRPSLIVSASKDESVRLWNVHTGICVLIFAGAGGHRNEVLSVDFHPSDRYRIASCGMDNTVKIWSMKEFLPYVEKSFTWTDLPSKFPTKYVQFPSVDNEIVLWEPKLKEQIPGEGSADILQKYPVPESDIWFIKFSCDFKYNAVAIGNREGKIFIWEVQSSPPVLIARLSNAQSKAPIRQTALSFDGSTLLCSCEDGTIWRWDAVTSS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00878 355 ProSiteProfiles Trp-Asp (WD) repeats profile. 133 175 IPR001680 GO:0005515
Bach13g00878 355 ProSiteProfiles Trp-Asp (WD) repeats profile. 179 214 IPR001680 GO:0005515
Bach13g00878 355 PANTHER POLYCOMB PROTEIN 7 353 - -
Bach13g00878 355 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 179 214 - -
Bach13g00878 355 SMART WD40_4 309 350 IPR001680 GO:0005515
Bach13g00878 355 SMART WD40_4 263 304 IPR001680 GO:0005515
Bach13g00878 355 SMART WD40_4 169 212 IPR001680 GO:0005515
Bach13g00878 355 SMART WD40_4 26 68 IPR001680 GO:0005515
Bach13g00878 355 SMART WD40_4 126 166 IPR001680 GO:0005515
Bach13g00878 355 SMART WD40_4 82 123 IPR001680 GO:0005515
Bach13g00878 355 Pfam WD domain, G-beta repeat 131 166 IPR001680 GO:0005515
Bach13g00878 355 Pfam WD domain, G-beta repeat 180 212 IPR001680 GO:0005515
Bach13g00878 355 PRINTS G protein beta WD-40 repeat signature 153 167 IPR020472 -
Bach13g00878 355 PRINTS G protein beta WD-40 repeat signature 337 351 IPR020472 -
Bach13g00878 355 PRINTS G protein beta WD-40 repeat signature 199 213 IPR020472 -
Bach13g00878 355 Gene3D - 20 353 IPR015943 GO:0005515
Bach13g00878 355 SUPERFAMILY WD40 repeat-like 26 350 IPR036322 GO:0005515
Bach13g00878 355 ProSitePatterns Trp-Asp (WD) repeats signature. 153 167 IPR019775 -
Bach13g00878 355 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 133 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00878 Bach-Chr13 14091257 14095878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00878 103 352 Miscellaneous Gene Families AT5G08390 21.875 4.15e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00878 K11462 - sind:105174820 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00878 13 14091257 14095878 Bach13g00878 13 14091257 14095878 ECH