Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00747 ATGAGTAACATTTCAAAAGCAGCGTTCTTCAGCATTTCTGTTCTTTTAATAGTTTTAGCAGTAGTCAGGGTTGAAGGTCGTTTTCTGAGAAGCAATGCTTCTGAATTAGTTTCAGATGGAGTTGCTGATGGTGTTCAACCCAACAAAGATTCCTACTTGGTTTTCAAAGGGATTGAATCATCTGAGAGTGATCAGTGTAAGCAAATGTATGGTTTCTTGCCATGTTCAAACAATATGTTTGGTCATCTCTTCCTGGTTTTGGTATATGAATATTTGCTGTTCCATGGAGAATCATATTTGGCTGCTGGTGGTAAGCAGATCTTCAAAATTCTTGGCCCTGGTGTTTTTGGTGCAAGTACCTTTGATATTCTTGGTGCTCTTCCAGAATCCTTAATTCTTCTTGCTTCTGGGCTTATTGGCAATAAAGAGGCTGCTCAAGAATATGCCATAACTGGTGTTGGTTTATTGGCTGGATCATCAATCTTGCTTCTTACATTTGTTTGGGGAACCTGTGTCATCACTGGCAAGCCAAAATTCAGAAATGATCCTTCTGGTTCAAACTCATCAAGGGGAGTCAATGATTATTCAAATTCTGGAGGCTCTAATGGCTCAAACTCATCAAAGGGATACCAAAATGATTCAAATTCATCAAGTGGAGGAATAAAGGCATTATTGAAGAGTTGGCTCAATATTACCAAAGAAAATGAGACTACTTACATGGCAATTATCATGGTTCTCTCAATCATACCACCCACGATGATGCAGATTCCCAATTTATTCCCATTCTCTTCTTCGTTAAGGACTATCACACTGATTATTGCTCTCATTGTCACTGTCATTTTTCTTGTCTTCTACTTGATTTACCAGCTCTTTGAACCTCATATACATAAGCTTATGAGACTACAATACGTGGAACATGACCACTTATTCTCAATAATTCTACAAGAAGTTCCGGAGCATACACTTCAAAGCATCCTCACCGTGAATGGGACTCCTAATGAAAATGCCATAAACAAGCTATTTGAGGTCTTGGATCGAAATAATGACAAAGTGATCTCGCGTTCTGAATTAAAGGAGCTTCTGGTGAGGACCAGATTAACTGACACAAATATCAACGAGGAGGAAGAAATACAAAAACTGTTAAAAATATTTGATAAGGATGGTAACCAAGAAATCAACAGAGAAGAATTTGTGGATGGCTTCACAGAATGGGTTATCCGAGTGCAGCTAGCTCTGGACAAACAGTGCCTCTCAAGAAAAGCAATGCAGAACATATACAAGGTATTCAAGCCATGTCTTGAAAACATAAGAAAAGAACGCGAAAAGAAGAAAAACTTGATGTCTGCAATTCTAACTTCTGTTGAGAGCGATATGGATGGCTTATCTGATAATTCTAATATTTATAGGTTCCTTGCGAAATTTGATAGCAATGGAGATGAGAAAATTTCAAAAGCTGAGTTAACAGAACTAGTTAAGAACCTTAAATCTGGTATAGCTTCAATAGATGTGGAAGATGCAGTTAAAAAAATCACTGAAGAGTTTGACAATGACGAGGACAATGAAATAAGTTATAAGGAATTTGTTGATGGGATTGAAAAGTTTCGTGAACCATCTTTGGGTCATCCTCCTGCTTCAATTTCTCCATCTGAAAATGAGACTAATCTGCAGGCCCTGTTTAATGTTGAAAAGTTGATCCAAGAGAATCACAGCAAAGGACTTGCTGCATGGTTCAAGGCTTTATTGAAAGTGGTGATAGGAATTATCATATTATCACTTCTTGCAGAGCCCTTAATATCAAGTGTTCAGAATTTCTCTCAAAGTGCAGGAATCCCATCATTCTTCATCTCATTCATAGTAGTCCCACTGGCTATAAATTTTAGGGAAGCAACTCTGGCGATCAAGAAAGCTAACCATGATAAGAAAAAGAGCACTACTTCTGAAACAGCTTACGAGATTTATGATGCAGTGTTCATGAACAATACTCTGGGCTTCCTTGCAATCTCAATTCTGACATATGCACGAGATATCACCTGGGAATTCTCAGCTGAACTGTTGGTTTTGGCAATCGTTTGTGCAATAATGGGCCTCATCACTGAATATTTTCGCTCCAAGTTTCCTCTGTGGACATCCATTGCTGCATACCTCTTGTACCCATCATCTTTGATTTTGGCCTTTTATCTCAATGATGTCTTGAATTATATTTAG 2205 0.381 MSNISKAAFFSISVLLIVLAVVRVEGRFLRSNASELVSDGVADGVQPNKDSYLVFKGIESSESDQCKQMYGFLPCSNNMFGHLFLVLVYEYLLFHGESYLAAGGKQIFKILGPGVFGASTFDILGALPESLILLASGLIGNKEAAQEYAITGVGLLAGSSILLLTFVWGTCVITGKPKFRNDPSGSNSSRGVNDYSNSGGSNGSNSSKGYQNDSNSSSGGIKALLKSWLNITKENETTYMAIIMVLSIIPPTMMQIPNLFPFSSSLRTITLIIALIVTVIFLVFYLIYQLFEPHIHKLMRLQYVEHDHLFSIILQEVPEHTLQSILTVNGTPNENAINKLFEVLDRNNDKVISRSELKELLVRTRLTDTNINEEEEIQKLLKIFDKDGNQEINREEFVDGFTEWVIRVQLALDKQCLSRKAMQNIYKVFKPCLENIRKEREKKKNLMSAILTSVESDMDGLSDNSNIYRFLAKFDSNGDEKISKAELTELVKNLKSGIASIDVEDAVKKITEEFDNDEDNEISYKEFVDGIEKFREPSLGHPPASISPSENETNLQALFNVEKLIQENHSKGLAAWFKALLKVVIGIIILSLLAEPLISSVQNFSQSAGIPSFFISFIVVPLAINFREATLAIKKANHDKKKSTTSETAYEIYDAVFMNNTLGFLAISILTYARDITWEFSAELLVLAIVCAIMGLITEYFRSKFPLWTSIAAYLLYPSSLILAFYLNDVLNYI 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00747 734 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Bach13g00747 734 ProSiteProfiles EF-hand calcium-binding domain profile. 502 537 IPR002048 GO:0005509
Bach13g00747 734 SUPERFAMILY EF-hand 337 531 IPR011992 -
Bach13g00747 734 Gene3D - 305 416 - -
Bach13g00747 734 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Bach13g00747 734 Gene3D - 426 529 - -
Bach13g00747 734 Pfam EF-hand domain pair 335 399 IPR002048 GO:0005509
Bach13g00747 734 Pfam EF-hand domain pair 466 529 IPR002048 GO:0005509
Bach13g00747 734 CDD EFh 339 402 IPR002048 GO:0005509
Bach13g00747 734 ProSiteProfiles EF-hand calcium-binding domain profile. 332 367 IPR002048 GO:0005509
Bach13g00747 734 ProSitePatterns EF-hand calcium-binding domain. 345 357 IPR018247 -
Bach13g00747 734 MobiDBLite consensus disorder prediction 182 214 - -
Bach13g00747 734 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 68 727 IPR004713 GO:0006812|GO:0008324|GO:0016020
Bach13g00747 734 Pfam Sodium/calcium exchanger protein 583 724 IPR004837 GO:0016020|GO:0055085
Bach13g00747 734 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
Bach13g00747 734 SMART efh_1 506 534 IPR002048 GO:0005509
Bach13g00747 734 SMART efh_1 336 364 IPR002048 GO:0005509
Bach13g00747 734 SMART efh_1 466 494 IPR002048 GO:0005509
Bach13g00747 734 SMART efh_1 376 404 IPR002048 GO:0005509
Bach13g00747 734 CDD EFh 473 531 IPR002048 GO:0005509
Bach13g00747 734 ProSitePatterns EF-hand calcium-binding domain. 515 527 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00747 Bach-Chr13 13077062 13080925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00747 425 728 EF-hand Containing Proteins AT1G53210 35.258 4.21e-45 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00747 - - gmx:100798009 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00747 13 13077062 13080925 Bach13g00747 13 13077062 13080925 ECH