Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00745 ATGAGGAAACCTTCAAGAGCAGCTTTCTTCACTTTCATTATTTTTGTAGTCTCTGTAGTTAATGTTGAAAGCCGCTTTCTGAGAAGCAATGCTTCTGAGCTGGTTTCAGATGGAGTTGATGGTGTTCAACCCAGTAAAGGTTCTTCCTCGTACTTGCTTCTCAAAGGGGGTGAATCGTCTGAGACTGAGACAGAGTGTGAGCAAATGTATGGGTTCTTGCCATGTTCAACTAGCATTTATGGTCATCTTTTCCTGGTTCTGGTATATGAGTATCTGTTGTTCCATGGAGAATCATACTTGGCTGCTGGTGGTAAGCAAATATTTGAATTGCTTGGCCCTGGTGTCTTTGGGGCAAGTGCCTTTGATATTCTTGGTGCTCTTCCAGAGTCCTTACTTCTTCTAGCTTCTGGACTTTCTGGTAATACGGAGACTGCACAAGAGTATGCTACAACTGGTGTTGGCTTATTAGCAGGATCATCCATCTTTCTTCTGACAGTGGTGTGGGGAACCTGTGTTATCATTGGGAAGCAACAATTCACAACTGATTCTAGAGCCTTCAGTTTCACAAATTCATGTGGAAGATTGAAAGCATTATTGACTGGTACTGGTATTACTGCAAATTATGAGACTACCCAGATGGCAAGAATCATGGTTCTCTCTGTCATACCACCTATGATTATGCAGACACCAAATATTTTCAATTTCTCTTCTGGACCACGCAACTTGACCTTTATGATTGCTCTCCTCATCACTATCCTTTTTCTCATCTTGTACTTAGCTTACCAGATCTTTGAACCTCATATACATAAAATTATAAGACTGGAATATGTGGAACATGATCACCTAATTTTAAAGATTGTACAACATGTTCCCAAGCATACCCTGCAAAGTATCCTCACCGAGAATGGAACTCCCAATGAAAGTGCCATAATGAGGCTGTTTACTGTAATAGATAAAAATGGGGATGGTGAAATATCAGCTTCTGAATTAAAGGACCTGCTGCTTAGAACCAGGTTAACTGAAGCAAAAACCAATGATGAGAATGATGTAGAACAGGTGTTTAAGATTTTTGACCAGGATGGTGACAAAAGAATAAGTAAAGAAGAATTTGTGAATGGCTTCAAAACATGGCTTGACCAAACTAAGCATGCTCTGGATAAACAGTATCTGTCAAGAGAAAAACAGACTAACATATACCAGGTTGTTAAGCCCTGGATTGAAAAGAAAAAAAGTGAACGTGAAATGAGGAAACATCTTAAATCTGAACTCTTAAGGCAAGTTAAGACTGATGTGGTTGACAGCCTTTCCATTAAAGAGGGCACAGCTGATGAACCTGCCATCCAAAGGTTGTTTGAGAAAATTGATAGCAATAAAGACAACCACATCTCACAATCTGAGTTAAAAGAACTGATCATGAGCATCAAGCCTGGTATGAATCCCGAAGATGTGGGAGAAGCACTTGGAAAAATCACACAAGAACTTGACATTAACAATGACAATGAAATCAGCGGGGAGGAATTTGCTGCTGTGCTTAAAAAATGGCTTCACCCATCACCCAGCCATTCTTCTCCATCACATTCAGTTTCTCACGAAGAAATTCATCCAATCTGGGAAAGTGTTGAAAAGGTGGTAGAAGAGAACCACAAGAAAGGACTAGTTGCATGGTTGAAGGCTATAATGAATGTGGTGCTAGGAATTGCAATGGTATCAGTTCTTGCAGAGCCCCTAATAGAAAGTGTCCAGAACTTCTCTCGTAGTGTTGGGATTTCATCTTTCTTCATCTCTTTTATTTTAGTCCCATTAGCCATAAATGCTAGAGAAACAAGTATGGCATTCAGAGAAGCTGGCCATAAGAAGAAATATAACACTTCTGAAACAATCTATGAGATTTATGATGCAGTCTTCATGAACAACACTCTTGGCTTTTTTGCAATTGCAATTCTGATATATGTGAGAGAAGTCACTTGGGAATTCTCAGCTGAAGTATTGGTTGTGGCAATTGTCTGTGCTATAATTGGCCTAGGTGCAAGTTTTTTCTCCAAGTTCCCTCTATGGACATCCTTCTGTGCATATCTCCTATACCCATTATCGTTGATTTTGGCATATGTTCTAACTCATGTTGTTCATTATGGTTAA 2136 0.3961 MRKPSRAAFFTFIIFVVSVVNVESRFLRSNASELVSDGVDGVQPSKGSSSYLLLKGGESSETETECEQMYGFLPCSTSIYGHLFLVLVYEYLLFHGESYLAAGGKQIFELLGPGVFGASAFDILGALPESLLLLASGLSGNTETAQEYATTGVGLLAGSSIFLLTVVWGTCVIIGKQQFTTDSRAFSFTNSCGRLKALLTGTGITANYETTQMARIMVLSVIPPMIMQTPNIFNFSSGPRNLTFMIALLITILFLILYLAYQIFEPHIHKIIRLEYVEHDHLILKIVQHVPKHTLQSILTENGTPNESAIMRLFTVIDKNGDGEISASELKDLLLRTRLTEAKTNDENDVEQVFKIFDQDGDKRISKEEFVNGFKTWLDQTKHALDKQYLSREKQTNIYQVVKPWIEKKKSEREMRKHLKSELLRQVKTDVVDSLSIKEGTADEPAIQRLFEKIDSNKDNHISQSELKELIMSIKPGMNPEDVGEALGKITQELDINNDNEISGEEFAAVLKKWLHPSPSHSSPSHSVSHEEIHPIWESVEKVVEENHKKGLVAWLKAIMNVVLGIAMVSVLAEPLIESVQNFSRSVGISSFFISFILVPLAINARETSMAFREAGHKKKYNTSETIYEIYDAVFMNNTLGFFAIAILIYVREVTWEFSAEVLVVAIVCAIIGLGASFFSKFPLWTSFCAYLLYPLSLILAYVLTHVVHYG 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00745 711 ProSitePatterns EF-hand calcium-binding domain. 495 507 IPR018247 -
Bach13g00745 711 CDD EFh 310 375 IPR002048 GO:0005509
Bach13g00745 711 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 68 702 IPR004713 GO:0006812|GO:0008324|GO:0016020
Bach13g00745 711 SUPERFAMILY EF-hand 309 512 IPR011992 -
Bach13g00745 711 ProSitePatterns EF-hand calcium-binding domain. 318 330 IPR018247 -
Bach13g00745 711 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Bach13g00745 711 Pfam EF-hand domain pair 445 510 IPR002048 GO:0005509
Bach13g00745 711 Pfam EF-hand domain pair 308 374 IPR002048 GO:0005509
Bach13g00745 711 ProSiteProfiles EF-hand calcium-binding domain profile. 345 380 IPR002048 GO:0005509
Bach13g00745 711 SMART efh_1 446 474 IPR002048 GO:0005509
Bach13g00745 711 SMART efh_1 349 377 IPR002048 GO:0005509
Bach13g00745 711 SMART efh_1 309 337 IPR002048 GO:0005509
Bach13g00745 711 SMART efh_1 486 514 IPR002048 GO:0005509
Bach13g00745 711 Gene3D - 271 374 - -
Bach13g00745 711 ProSiteProfiles EF-hand calcium-binding domain profile. 305 340 IPR002048 GO:0005509
Bach13g00745 711 Gene3D - 375 529 - -
Bach13g00745 711 Pfam Sodium/calcium exchanger protein 562 702 IPR004837 GO:0016020|GO:0055085
Bach13g00745 711 ProSiteProfiles EF-hand calcium-binding domain profile. 482 517 IPR002048 GO:0005509
Bach13g00745 711 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Bach13g00745 711 ProSitePatterns EF-hand calcium-binding domain. 358 370 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00745 Bach-Chr13 13063358 13067055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00745 398 706 EF-hand Containing Proteins AT1G53210 39.144 5.97e-58 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00745 - - aprc:113855499 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00745 13 13063358 13067055 Bach13g00745 13 13063358 13067055 ECH