Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00743 ATGGCTCTCTCTACCCGTCTCACTCTCTTCCTCTTCCTTTCATTTCTTATCCTTTGCAGTCAAGCCCATGGTCGCTTCGTTAGCCACCTTTTATCTGCTTCTTCATCTTCCTCTGATCTGGTCTCTGATGGGGTCCATGATTCCCAGAAGCCACCGGAGAGTTTGCTTCTGATCCACCGTCCATTTGGGTTCCTTTCAGAGTCTACATGCGAGCAGACTTATGGGTTTTTGCCCTGCACCACCACTGTGCTCGGAAACTTGTTCCTTATTATCATTTATGGCTTCCTCATGTACAAGGCTGCAACCTACTTGTCCAATGGGAGTGAGCTGCTGCTTGAGATCTTGGGGCCTGGTATTGTTGGTGGGCTGTTCCTTCCCATTCTCGGGGCGCTGCCAGACGCCATGCTTATTCTCGTATCTGGGCTTTCTGGTGATAAAGAAACTGCTCAGAGTCAGGTCTCCGTTGGAATGGGTTTGCTAGCTGGGTCAACAACTCTTCTTTTGACTATAATATGGGGAGTCTGCGTAATTGTTGGCAAGTGCGACCTCGTGGATACAATTGCAGTAGACACACAAGACACAAGGGGGTATAGTTTAACTGGTTCTGGTGTCAGTACTGATATTTGGACAAGTTATGCTGCAAGAATTATGGTTATATCAGTTCTTCCATTTTTGATAGTTCAACTCCCACAAATTCTCAATTCAACTTCTGGAAGGCACTTAGCTGTTTTGATTGCACTTATTGTCTCTCTTGCTTTGCTGATTATTTATTGCCTGTACCAGATTTTCCAACCTTGGATACAGAGGAGAAAGCTTGCTTATGTGAAACACAAACATGTTATTTTTGGAATTTTGAGGCATTTAGGAAGCTTGGTGAAAGAGGATGGTGAACCTGACAATGAAATTATAAAGAAGCTTTTTAAGGCAATTGATGAAAATGGGGATGGGACGCTATCCCACAGTGAACTGAAAGGACTTGTGGTTGGAATCAATTTTGAGGAGATTGACCTGGATCACGATGATGCTGTGCAGAAAATAATGAGCGAGTTTGATACCTCCATTAATGGTACTGTTGAGGAAGAGGAGTTTGTAAATGGCATCTGCAAATGGATTAGAAGTGCTCAGCGTCATTCTCGGGTTGTTTCTGGTTATTCCGGTTCTCAATCAATGAAGTTTTTACATGATTTTCATCAAGAAACAAAGAGGGAGCGTGATCTATTATATGTGGGGGATCAGAGTGTTGAAGTTGTTGAGGGTGTTGCAAATGCCAAATGGACTTCCGTCAAAGCAGTGTTACTGCTACTGTTGGGTACTGTTATTGCTGCTGCATTTGCCGATCCTCTGGTTGATGTGGTTGATAACTTTTCTGATGCCACAAGTATTCCTGCTTTCTTCATTTCCTTCATTGCACTTCCTTTGGCCACCAATTCAAGTGAAGCAGTGTCAGCAATTATTTTTGCTAGTCGTGACAAGAGGCAGACTGCCTCGTTAACTTTTTCCGAGCTATATGGTGCTGTTACGATGAACAATGTGCTTTGCCTGTCAGTGTTCTTGGCCCTTGTTTATTTTTCGGACACACTTCCCTCTCTGGACATCTATACTGGCTATCCTGCTTTACCCCTTCTCCCTGGCATTGATCTATGTTCTTGA 1650 0.4376 MALSTRLTLFLFLSFLILCSQAHGRFVSHLLSASSSSSDLVSDGVHDSQKPPESLLLIHRPFGFLSESTCEQTYGFLPCTTTVLGNLFLIIIYGFLMYKAATYLSNGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGDKETAQSQVSVGMGLLAGSTTLLLTIIWGVCVIVGKCDLVDTIAVDTQDTRGYSLTGSGVSTDIWTSYAARIMVISVLPFLIVQLPQILNSTSGRHLAVLIALIVSLALLIIYCLYQIFQPWIQRRKLAYVKHKHVIFGILRHLGSLVKEDGEPDNEIIKKLFKAIDENGDGTLSHSELKGLVVGINFEEIDLDHDDAVQKIMSEFDTSINGTVEEEEFVNGICKWIRSAQRHSRVVSGYSGSQSMKFLHDFHQETKRERDLLYVGDQSVEVVEGVANAKWTSVKAVLLLLLGTVIAAAFADPLVDVVDNFSDATSIPAFFISFIALPLATNSSEAVSAIIFASRDKRQTASLTFSELYGAVTMNNVLCLSVFLALVYFSDTLPSLDIYTGYPALPLLPGIDLCS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00743 549 Pfam Sodium/calcium exchanger protein 430 520 IPR004837 GO:0016020|GO:0055085
Bach13g00743 549 Pfam Sodium/calcium exchanger protein 88 264 IPR004837 GO:0016020|GO:0055085
Bach13g00743 549 Gene3D - 116 281 IPR044880 -
Bach13g00743 549 ProSiteProfiles EF-hand calcium-binding domain profile. 298 333 IPR002048 GO:0005509
Bach13g00743 549 Pfam EF-hand domain pair 303 365 IPR002048 GO:0005509
Bach13g00743 549 ProSitePatterns EF-hand calcium-binding domain. 311 323 IPR018247 -
Bach13g00743 549 Gene3D - 282 383 - -
Bach13g00743 549 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 70 525 IPR004713 GO:0006812|GO:0008324|GO:0016020
Bach13g00743 549 SMART efh_1 342 370 IPR002048 GO:0005509
Bach13g00743 549 SMART efh_1 302 330 IPR002048 GO:0005509
Bach13g00743 549 SUPERFAMILY EF-hand 297 370 IPR011992 -
Bach13g00743 549 CDD EFh 303 367 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00743 Bach-Chr13 13049033 13053491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00743 22 522 EF-hand Containing Proteins AT1G53210 64.062 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00743 - - qsa:O6P43_001016 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00743 13 13049033 13053491 Bach13g00743 13 13049033 13053491 ECH