Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00693 ATGGCTGCATATACCCCAAAGAATATCCTCATAACTGGGGCAGCTGGATTTATTGCATCCCATGTTGCCAACCGGCTTGTCCGGAACTACCCTTACTACAAAATTGTTGTGCTTGACAAACTTGATTACTGTTCTAATCTGAAAAACCTTCTTCCTTCCAAATCATCTCCCAACTTCAAGTTTGTGAAGGGGGATATTGGAAGTGCAGACCTTGTCAACTACCTTCTCATCACCGAGTCCATTGACACAATAATGCACTTTGCTGCACAGACCCATGTTGACAACTCCTTTGGTAATAGCTTCGAGTTTACCAAGAACAACATATATGGCACTCATGTCCTACTAGAAGCCTGCAAGGTCACTGGCCAGATCAGAAGGTTCATTCATGTGAGCACAGATGAGGTCTATGGCGAGACAGATGAGGATGCTGTTGTGGGAAACCACGAGGCTTCTCAACTTCTTCCTACGAACCCGTACTCTGCAACAAAAGCTGGAGCAGAAATGCTTGTCATGGCATATGGCAGGTCATATGGGTTACCTGTGATCACAACACGTGGAAATAATGTTTATGGCCCCAATCAGTTTCCTGAGAAGTTGATTCCAAAGTTCATCCTCTTGGCTATGCAAGGCAAAGTTCTCCCCATTCATGGGGATGGTTCTAACGTGAGGAGTTATTTATATTGTGAAGATGTTGCAGAGGCTTTTGAAGTTATCCTTCACAAGGGGGAGGTTGGCCATGTTTATAATGTTGGGACTACGAAGGAAAGAAGAGTTATTGATGTAGCCAAAGACATATGCAGACTTTTCTCAATGGATCCCGAGACAAGCATAAAATGTGTAGATAACAGACCATTTAATGACCAGAGATACTTCCTTGATGATCAAAAGCTGAAGATCTTGGGTTGGTCTGAGAGGACCACATGGGAAGAGGGGTTGAAGAAAACCATGGAGTGGTATATCAAGAACCCTGATTGGTGGGGTGATGTCAGTGGAGCATTGCTTCCTCATCCAAGGATGCTGATGATGCCTGGTGGGATGGAGAAACATTTTGATGGATCTGAAGACGAGAAACCTGCATCCTATGTCTCAAGCAATACCCGAATGGTGGTTCCATTATCAAAAACAGCTGGCACTCAGCAGAAACATCCTTACAAGTTCCTGATCTATGGTAGAACAGGGTGGATTGGGGGTCTGCTAGGGAAACTGTGTGAAAAACAAGGGATTCCATATGAATATGGAAAAGGGCGTCTTGAGGATCGCACATCTCTCATAGCAGATATACAGAGCGTGAAGCCAACCCATGTTTTTAATGCTGCAGGTGTGACAGGCAGACCAAATGTTGATTGGTGTGAATCTCATAAAACAGAGACAATCCGCACCAATGTTGCTGGCACTTTAACCTTGGCTGATGTCTGCAGAGAGAATGGAATTTTAATGATAAATTATGCTACTGGCTGCATATTTGAATATGATGCTGCACATCCAGAGGGTTCTGGCGTTGGTTTTAAGGAGGAAGACAAACCCAATTTCACTGGTTCTTTCTACTCTAAAACGAAGGCCATGGTTGAAGAACTTTTGAAGGAATACGACAATGTGTGCACCCTCAGGGTTCGTATGCCAATTTCCTCTGACCTTAATAACCCACGCAACTTCATTACTAAGATTAGCCGTTACAACAAAGTGGTTAATATTCCAAACAGCATGACTATCTTGGATGAACTTCTACCTATTTCCATTGAGATGGCAAAGCGAAATTTGAGGGGCATCTGGAACTTCACAAATCCTGGGGTTGTTAGCCACAATGAGATCCTTGAGATGTACAGAGATTACATTGACCCCAGCTTCAAATGGAACAACTTCACACTTGAAGAGCAAGCCAAGGTGATCGTTGCTCCACGAAGCAACAATGAGATGGATGCATCCAAGTTGAAGAAAGAGTTCCCTGAGATGCTTCCCATTAAGGACTCACTGATCAAGTATGTCTTCGAACCGAACAAGAAAACCAGTACAAAGTAA 2016 0.436 MAAYTPKNILITGAAGFIASHVANRLVRNYPYYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKVLPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHVYNVGTTKERRVIDVAKDICRLFSMDPETSIKCVDNRPFNDQRYFLDDQKLKILGWSERTTWEEGLKKTMEWYIKNPDWWGDVSGALLPHPRMLMMPGGMEKHFDGSEDEKPASYVSSNTRMVVPLSKTAGTQQKHPYKFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRLEDRTSLIADIQSVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCRENGILMINYATGCIFEYDAAHPEGSGVGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYRDYIDPSFKWNNFTLEEQAKVIVAPRSNNEMDASKLKKEFPEMLPIKDSLIKYVFEPNKKTSTK 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00693 671 Gene3D - 9 313 - -
Bach13g00693 671 CDD dTDP_GD_SDR_e 7 324 IPR005888 GO:0008460|GO:0009225
Bach13g00693 671 CDD dTDP_HR_like_SDR_e 385 657 - -
Bach13g00693 671 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 375 671 - -
Bach13g00693 671 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 332 IPR036291 -
Bach13g00693 671 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 4 338 - -
Bach13g00693 671 Gene3D - 200 322 - -
Bach13g00693 671 Gene3D - 374 671 - -
Bach13g00693 671 FunFam UDP-glucose 4,6-dehydratase 9 213 - -
Bach13g00693 671 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 379 660 IPR036291 -
Bach13g00693 671 Pfam RmlD substrate binding domain 385 555 IPR029903 -
Bach13g00693 671 Pfam GDP-mannose 4,6 dehydratase 10 315 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00693 Bach-Chr13 12482821 12484921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00693 8 320 Miscellaneous Gene Families AT4G00110 27.164 3.18e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00693 K12450 - gmx:100803187 1274.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00693 13 12482821 12484921 Bach13g00693 13 12482821 12484921 ECH