Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01483 ATGGCTTCTATTCCATGCACTACCCACCGACCTATTTCTTCAAAACCTTCAGCTTCCCCTGTTTCTTCATCAAAATTGGCTTCTCGCTTTCTTGGTACCAAAAGTAAAGTTGGGTTTCTCAGACTTACCTCTCAGATTGGACCCTCTAATGGCTCCAGAACCACGTGCTGGTTTAAATTTGGTAATAATGGGGTCGATGCAGAAGGTGCTGGAATTTATGGTAGCCAATCTCGTGACGATTTTGATAGAGATGATGTTGAGCAGTATTTCAACTACATGGGGATGCTTGCTGTTGAGGGATCATATGACAAAATGGAGTCTCTTTTAAACCAAAACATCCACCCAGTGGACATCTTACTACTTTTAGCTGCCACAGAAGGTGACAAGCCAAAAATTGAGGAGCTCTTGAGAGCTGGAGCAAAACATGATGTAAAGGATAAAAATGGAAGGACTGCACTGGATAGGGCTAATGATGAAATCAGAGATTTCATTCTTAGTTTTTCAGCGCAGAAGGCATGA 519 0.422 MASIPCTTHRPISSKPSASPVSSSKLASRFLGTKSKVGFLRLTSQIGPSNGSRTTCWFKFGNNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGSYDKMESLLNQNIHPVDILLLLAATEGDKPKIEELLRAGAKHDVKDKNGRTALDRANDEIRDFILSFSAQKA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01483 172 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 172 IPR044242 GO:0006886|GO:0009570|GO:0090391
Bach12g01483 172 MobiDBLite consensus disorder prediction 1 23 - -
Bach12g01483 172 FunFam Protein LHCP TRANSLOCATION DEFECT 80 171 - -
Bach12g01483 172 Gene3D - 76 170 IPR036770 -
Bach12g01483 172 SUPERFAMILY Ankyrin repeat 95 167 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01483 Bach-Chr12 10494542 10496047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01483 - - pcin:129303746 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01483 12 10494542 10496047 Bach12g01483 12 10494542 10496047 ECH