Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01421 AAAACATTGCTCGTCTTCCCTCCTAGCTAGCGCGAGCAGTTGTCGCCTCTAGGAGTCTAGAATCAGCGGTAGGTTCAAGGGTGGTGTCGCGTCGAATATTTTGGTCCAGAACGGTTTATTTGTGAGGTTGGGCGTTAATTGGGTCAGCAAAAGCAGAATGCTTCCACAACGTATGAAGAAAAGCATCACCGATAATCCAAAGAAGCTTGCCAACTTGATTGACCTTGTAAATCTTCCCTCCACACTTAGAGAGTGTGTGGGTCAATCTCAGATTTCTCGCTTGGGCTGTTTTATGCGCGTTTGGTCCTACATCAAAACCAATAATCTTCAGGATCCAAATAACAAGAATGTTGTCAACTGTGATGACAAATTGAGAAGCATTCTGATGGGGAAAGCACAGGTTGAGCTCGCAGAACTTCCTGCACTTGTTAAGCTGCATTTTCCCAAAGAGCCCAAGTAATGTGTTATCTCAATGTTAAATTCGAAGAGCAGATATCGGAGAATACTAGAGTGATACTTGAGAAAGAACCTCGATTTATACAAATAATTTATGTTTATATTGTACAAGTAATGTCTCATTGTTTAAAGGAACTCGGCAAGAGAATTCTTAATCACGTCATCAGCAATAATTTTGTTAGTTTTCTCCGTGGGATGGAAG 658 0.4134 MLPQRMKKSITDNPKKLANLIDLVNLPSTLRECVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDDKLRSILMGKAQVELAELPALVKLHFPKEPK 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01421 100 CDD SWIB-MDM2_like 24 95 - -
Bach12g01421 100 SUPERFAMILY SWIB/MDM2 domain 16 97 IPR036885 -
Bach12g01421 100 Gene3D SWIB/MDM2 domain 7 100 IPR036885 -
Bach12g01421 100 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 12 100 - -
Bach12g01421 100 SMART swib_2 20 100 IPR019835 -
Bach12g01421 100 Pfam SWIB/MDM2 domain 24 95 IPR003121 -
Bach12g01421 100 ProSiteProfiles SWIB/MDM2 domain profile. 19 97 IPR003121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01421 Bach-Chr12 10056777 10058303 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Bach12g01421 SWIB 3.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01421 - - tcc:18593428 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01421 12 10056777 10058303 Bach12g01421 12 10056777 10058303 ECH